WormBase Tree Display for Gene: WBGene00009431
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WBGene00009431 | SMap | S_parent | Sequence | F35E12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | dct-17 | Paper_evidence | WBPaper00031095 | |||
Person_evidence | WBPerson1157 | ||||||
Sequence_name | F35E12.7 | ||||||
Molecular_name (12) | |||||||
Other_name | CELE_F35E12.7 | Accession_evidence | NDB | BX284605 | |||
Public_name | dct-17 | ||||||
DB_info | Database | WormQTL | gene | WBGene00009431 | |||
WormFlux | gene | WBGene00009431 | |||||
NDB | locus_tag | CELE_F35E12.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009431|UniProtKB=O02360 | |||||
family | PTHR21447 | ||||||
NCBI | gene | 179865 | |||||
RefSeq | protein | NM_001028708.6 | |||||
NM_001028706.7 | |||||||
NM_001028709.5 | |||||||
NM_001028707.6 | |||||||
TREEFAM | TREEFAM_ID | TF316592 | |||||
TrEMBL | UniProtAcc | Q52GY1 | |||||
O02360 | |||||||
Q52GY0 | |||||||
Q52GX8 | |||||||
UniProt_GCRP | UniProtAcc | O02360 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dct | ||||||
Allele (83) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00027144 | ||||||
00027145 | |||||||
00027146 | |||||||
00027147 | |||||||
00027148 | |||||||
Ortholog (48) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium and innate immune response. Located in membrane raft. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F35E12.7a | |||||
F35E12.7b | |||||||
F35E12.7c | |||||||
F35E12.7d | |||||||
Corresponding_CDS_history | F35E12.7:wp142 | ||||||
Corresponding_transcript | F35E12.7a.1 | ||||||
F35E12.7b.1 | |||||||
F35E12.7c.1 | |||||||
F35E12.7d.1 | |||||||
Other_sequence | CJC00920_1 | ||||||
Associated_feature | WBsf1001882 | ||||||
WBsf1020760 | |||||||
WBsf234854 | |||||||
Experimental_info | RNAi_result | WBRNAi00046339 | Inferred_automatically | RNAi_primary | |||
WBRNAi00095421 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031779 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085295 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095406 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014334 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094557 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017736 | ||||||
Expr1150227 | |||||||
Expr2010816 | |||||||
Expr2029053 | |||||||
Drives_construct | WBCnstr00032192 | ||||||
Construct_product | WBCnstr00032192 | ||||||
Microarray_results (30) | |||||||
Expression_cluster (319) | |||||||
Interaction | WBInteraction000383133 | ||||||
WBInteraction000438155 | |||||||
Map_info | Map | V | Position | 5.58631 | Error | 0.000175 | |
Positive | Positive_clone | F35E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028482 | ||||||
WBPaper00031095 | |||||||
WBPaper00032196 | |||||||
WBPaper00032370 | |||||||
WBPaper00034005 | |||||||
WBPaper00037777 | |||||||
WBPaper00058665 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |