WormBase Tree Display for Gene: WBGene00009490

WBGene00009490 SMap: S_parent: Sequence: F36G9
  Identity: Version: 2
    Name: CGC_name: fbxa-99 Person_evidence: WBPerson655
      Sequence_name: F36G9.14
      Molecular_name: F36G9.14
        F36G9.14.1
        CE15991
      Other_name: CELE_F36G9.14 Accession_evidence: NDB BX284605
      Public_name: fbxa-99
    DB_info: Database: AceView gene 5Q458
        WormQTL gene WBGene00009490
        WormFlux gene WBGene00009490
        NDB locus_tag CELE_F36G9.14
        Panther gene CAEEL|WormBase=WBGene00009490|UniProtKB=O45480
          family PTHR23015
        NCBI gene 185377
        RefSeq protein NM_074607.6
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc O45480
        UniProt_GCRP UniProtAcc O45480
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-99
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (87)
    RNASeq_FPKM (74)
    Ortholog (18)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in AIML; AIMR; g1AL; g1AR; and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including age-1; let-60; and elt-2 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Heme; tryptophan; and Alovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F36G9.14
    Corresponding_transcript: F36G9.14.1
    Other_sequence: FG647779.1
    Associated_feature: WBsf1021079
  Experimental_info: RNAi_result: WBRNAi00046505 Inferred_automatically: RNAi_primary
      WBRNAi00014427 Inferred_automatically: RNAi_primary
      WBRNAi00031867 Inferred_automatically: RNAi_primary
      WBRNAi00103337 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010944
      Expr1150386
      Expr2011593
      Expr2029832
    Drives_construct: WBCnstr00032145
    Construct_product: WBCnstr00032145
    Microarray_results (16)
    Expression_cluster (108)
    Interaction (18)
  Map_info: Map: V Position: 9.29797 Error: 0.000205
    Positive: Positive_clone: F36G9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene