WormBase Tree Display for Gene: WBGene00009571
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| WBGene00009571 | SMap | S_parent | Sequence | F40D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F40D4.12 | |||||||
| Molecular_name | F40D4.12 | ||||||||
| F40D4.12.1 | |||||||||
| CE19846 | |||||||||
| Other_name | CELE_F40D4.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F40D4.12 | ||||||||
| DB_info | Database | AceView | gene | 5R637 | |||||
| WormQTL | gene | WBGene00009571 | |||||||
| WormFlux | gene | WBGene00009571 | |||||||
| NDB | locus_tag | CELE_F40D4.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009571|UniProtKB=Q9XV32 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 185530 | |||||||
| RefSeq | protein | NM_074939.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322099 | |||||||
| TrEMBL | UniProtAcc | Q9XV32 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XV32 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (67) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Enriched in AFD and intestine based on tiling array and RNA-seq studies. Is affected by several genes including elt-2; sir-2.1; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including multi-walled carbon nanotube; Rifampin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40D4.12 | |||||||
| Corresponding_transcript | F40D4.12.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00046827 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014635 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032013 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015551 | ||||||||
| Expr1150698 | |||||||||
| Expr2003521 | |||||||||
| Expr2021736 | |||||||||
| Drives_construct | WBCnstr00032095 | ||||||||
| Construct_product | WBCnstr00032095 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (58) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | F40D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 12.8058 | |||||||
| Method | Gene |
