WormBase Tree Display for Gene: WBGene00009678
expand all nodes | collapse all nodes | view schema
| WBGene00009678 | SMap | S_parent | Sequence | F44D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | magu-4 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F44D12.1 | ||||||||
| Molecular_name | F44D12.1a | ||||||||
| F44D12.1a.1 | |||||||||
| CE52520 | |||||||||
| F44D12.1b | |||||||||
| CE52466 | |||||||||
| F44D12.1b.1 | |||||||||
| Other_name | CELE_F44D12.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | magu-4 | ||||||||
| DB_info | Database | AceView | gene | 4K777 | |||||
| WormQTL | gene | WBGene00009678 | |||||||
| WormFlux | gene | WBGene00009678 | |||||||
| NDB | locus_tag | CELE_F44D12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009678|UniProtKB=Q20398 | |||||||
| family | PTHR46360 | ||||||||
| NCBI | gene | 177860 | |||||||
| RefSeq | protein | NM_001380427.2 | |||||||
| NM_069404.6 | |||||||||
| TrEMBL | UniProtAcc | S6F5A3 | |||||||
| Q20398 | |||||||||
| UniProt_GCRP | UniProtAcc | Q20398 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Feb 2012 16:30:56 | WBPerson2970 | Name_change | CGC_name | magu-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | magu | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00031445 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00068026 | ||||||||
| 00068027 | |||||||||
| 00068028 | |||||||||
| 00068029 | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00013683 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to be involved in negative regulation of hippo signaling. Expressed in hypodermis; neurons; pharynx; spermatheca; and vulval cell. Is an ortholog of human DLG5 (discs large MAGUK scaffold protein 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44D12.1a | |||||||
| F44D12.1b | |||||||||
| Corresponding_CDS_history | F44D12.1a:wp263 | ||||||||
| F44D12.1b:wp263 | |||||||||
| Corresponding_transcript | F44D12.1a.1 | ||||||||
| F44D12.1b.1 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf646275 | ||||||||
| WBsf717175 | |||||||||
| WBsf997534 | |||||||||
| WBsf997535 | |||||||||
| WBsf1018035 | |||||||||
| WBsf228914 | |||||||||
| WBsf228915 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032234 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077322 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001912 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047273 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114317 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr136 | ||||||||
| Expr1025342 | |||||||||
| Expr1034233 | |||||||||
| Expr1151128 | |||||||||
| Expr2013355 | |||||||||
| Expr2031587 | |||||||||
| Drives_construct | WBCnstr00032000 | ||||||||
| Construct_product | WBCnstr00032000 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (37) | |||||||||
| Map_info | Map | IV | Position | 4.46496 | |||||
| Positive | Positive_clone | F44D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
