WormBase Tree Display for Gene: WBGene00009820
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| WBGene00009820 | SMap | S_parent | Sequence | F47B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F47B10.9 | |||||||
| Molecular_name | F47B10.9 | ||||||||
| F47B10.9.1 | |||||||||
| CE03359 | |||||||||
| Other_name | CELE_F47B10.9 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F47B10.9 | ||||||||
| DB_info | Database | AceView | gene | XL530 | |||||
| WormQTL | gene | WBGene00009820 | |||||||
| WormFlux | gene | WBGene00009820 | |||||||
| NDB | locus_tag | CELE_F47B10.9 | |||||||
| NCBI | gene | 185906 | |||||||
| RefSeq | protein | NM_077423.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317616 | |||||||
| TrEMBL | UniProtAcc | Q20509 | |||||||
| UniProt_GCRP | UniProtAcc | Q20509 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00018946 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007778 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015567 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018137 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapapapa; ABalapppapa; ABalppppapa; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and let-60 based on microarray; RNA-seq; and tiling array studies. Is affected by thirteen chemicals including rotenone; levamisole; and tert-Butylhydroperoxide based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47B10.9 | |||||||
| Corresponding_transcript | F47B10.9.1 | ||||||||
| Other_sequence | CR10363 | ||||||||
| CRC07385_1 | |||||||||
| CBC09497_1 | |||||||||
| CJC13193_1 | |||||||||
| Associated_feature | WBsf1006849 | ||||||||
| WBsf1023782 | |||||||||
| WBsf237912 | |||||||||
| WBsf237913 | |||||||||
| WBsf237914 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047602 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032408 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015152 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091118 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018288 | ||||||||
| Expr1034290 | |||||||||
| Expr1151438 | |||||||||
| Expr2003830 | |||||||||
| Expr2022050 | |||||||||
| Drives_construct | WBCnstr00031893 | ||||||||
| Construct_product | WBCnstr00031893 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Positive | Positive_clone | F47B10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 2.68966 | |||||||
| Reference | WBPaper00065394 | ||||||||
| Method | Gene |
