WormBase Tree Display for Gene: WBGene00009836
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| WBGene00009836 | SMap | S_parent | Sequence | F47H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-185 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F47H4.4 | ||||||||
| Molecular_name | F47H4.4 | ||||||||
| F47H4.4.1 | |||||||||
| CE42354 | |||||||||
| Other_name | CELE_F47H4.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-185 | ||||||||
| DB_info | Database | AceView | gene | 5R813 | |||||
| WormQTL | gene | WBGene00009836 | |||||||
| WormFlux | gene | WBGene00009836 | |||||||
| NDB | locus_tag | CELE_F47H4.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009836|UniProtKB=Q9XU25 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 185951 | |||||||
| RefSeq | protein | NM_074987.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q9XU25 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XU25 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-185 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (125) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (57) | |||||||||
| Paralog (228) | |||||||||
| Structured_description | Automated_description | Enriched in intestine and neurons based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; elt-2; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47H4.4 | |||||||
| Corresponding_CDS_history | F47H4.4:wp188 | ||||||||
| Corresponding_transcript | F47H4.4.1 | ||||||||
| Other_sequence | Tcol_isotig02095 | ||||||||
| Tcol_isotig02094 | |||||||||
| Associated_feature | WBsf1002640 | ||||||||
| WBsf1002641 | |||||||||
| WBsf1021260 | |||||||||
| WBsf1021261 | |||||||||
| WBsf233143 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015221 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047703 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102262 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1151540 | ||||||||
| Expr2011505 | |||||||||
| Drives_construct | WBCnstr00031881 | ||||||||
| Construct_product | WBCnstr00031881 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (45) | |||||||||
| Interaction | WBInteraction000119652 | ||||||||
| WBInteraction000120491 | |||||||||
| WBInteraction000201235 | |||||||||
| WBInteraction000255789 | |||||||||
| WBInteraction000331260 | |||||||||
| WBInteraction000357591 | |||||||||
| Map_info | Map | V | Position | 12.8641 | Error | 0.00097 | |||
| Positive | Positive_clone | F47H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
