WormBase Tree Display for Gene: WBGene00009955
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| WBGene00009955 | SMap | S_parent | Sequence | F53B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eak-4 | Paper_evidence | WBPaper00027748 | |||||
| Person_evidence | WBPerson545 | ||||||||
| Sequence_name | F53B2.3 | ||||||||
| Molecular_name | F53B2.3 | ||||||||
| F53B2.3.1 | |||||||||
| CE05917 | |||||||||
| Other_name | CELE_F53B2.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | eak-4 | ||||||||
| DB_info | Database | AceView | gene | 4N284 | |||||
| WormQTL | gene | WBGene00009955 | |||||||
| WormFlux | gene | WBGene00009955 | |||||||
| NDB | locus_tag | CELE_F53B2.3 | |||||||
| NCBI | gene | 186150 | |||||||
| RefSeq | protein | NM_069997.2 | |||||||
| SwissProt | UniProtAcc | G5EBR8 | |||||||
| TREEFAM | TREEFAM_ID | TF343588 | |||||||
| UniProt_GCRP | UniProtAcc | G5EBR8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Aug 2006 11:39:27 | WBPerson2970 | Name_change | CGC_name | eak-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eak | ||||||||
| Allele (28) | |||||||||
| Strain | WBStrain00036506 | ||||||||
| WBStrain00003889 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00010078 | ||||||||
| 00010079 | |||||||||
| 00010080 | |||||||||
| 00010081 | |||||||||
| 00010082 | |||||||||
| 00010083 | |||||||||
| 00010084 | |||||||||
| 00010085 | |||||||||
| 00010086 | |||||||||
| 00010087 | |||||||||
| Ortholog (14) | |||||||||
| Paralog | WBGene00008833 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00020565 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | eak-4 encodes a novel protein that contains an N-myristoylation signal; eak-4 acts in parallel to akt-1 to regulate insulin-like signaling and dauer formation; EAK-4 is expressed primarily in the neuroendocrine XXXL/R cells, where it associates with the plasma membrane. | Paper_evidence | WBPaper00027748 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 11 Dec 2006 00:00:00 | ||||||||
| Automated_description | Involved in dauer larval development. Located in plasma membrane. Expressed in XXXL and XXXR. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53B2.3 | |||||||
| Corresponding_transcript | F53B2.3.1 | ||||||||
| Associated_feature | WBsf1018386 | ||||||||
| WBsf231033 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048077 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015475 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032669 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4399 | ||||||||
| Expr4400 | |||||||||
| Expr1018999 | |||||||||
| Expr1151887 | |||||||||
| Expr2011147 | |||||||||
| Expr2029383 | |||||||||
| Drives_construct | WBCnstr00006446 | ||||||||
| WBCnstr00007253 | |||||||||
| WBCnstr00011968 | |||||||||
| WBCnstr00031790 | |||||||||
| Construct_product | WBCnstr00011968 | ||||||||
| WBCnstr00031790 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (52) | |||||||||
| Interaction | WBInteraction000008844 | ||||||||
| WBInteraction000052274 | |||||||||
| WBInteraction000247903 | |||||||||
| WBInteraction000503473 | |||||||||
| WBInteraction000521009 | |||||||||
| Map_info | Map | IV | Position | 6.01277 | Error | 0.002177 | |||
| Positive | Positive_clone | F53B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027748 | ||||||||
| WBPaper00027944 | |||||||||
| WBPaper00031480 | |||||||||
| WBPaper00036004 | |||||||||
| WBPaper00038936 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
