WormBase Tree Display for Gene: WBGene00009985
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| WBGene00009985 | SMap | S_parent | Sequence | F53F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F53F4.1 | |||||||
| Molecular_name | F53F4.1 | ||||||||
| F53F4.1.1 | |||||||||
| CE10954 | |||||||||
| Other_name | CELE_F53F4.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F53F4.1 | ||||||||
| DB_info | Database | AceView | gene | 5O65 | |||||
| WormQTL | gene | WBGene00009985 | |||||||
| WormFlux | gene | WBGene00009985 | |||||||
| NDB | locus_tag | CELE_F53F4.1 | |||||||
| NCBI | gene | 186174 | |||||||
| RefSeq | protein | NM_073964.2 | |||||||
| TrEMBL | UniProtAcc | Q20726 | |||||||
| UniProt_GCRP | UniProtAcc | Q20726 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00032640 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| WBGene00052829 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00193163 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| chrV_pilon.g16278 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in GABAergic neurons; amphid sheath cell; excretory cell; and germ line based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and clk-1 based on microarray; RNA-seq; and tiling array studies. Is affected by four chemicals including cholesterol; bortezomib; and Oligosaccharides based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53F4.1 | |||||||
| Corresponding_transcript | F53F4.1.1 | ||||||||
| Associated_feature | WBsf232798 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00032701 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015522 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048145 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021282 | ||||||||
| Expr1151955 | |||||||||
| Expr2004080 | |||||||||
| Expr2022304 | |||||||||
| Drives_construct | WBCnstr00031763 | ||||||||
| Construct_product | WBCnstr00031763 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (64) | |||||||||
| Interaction | WBInteraction000315606 | ||||||||
| WBInteraction000391085 | |||||||||
| Map_info | Positive | Positive_clone | F53F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 5.46396 | |||||||
| Reference | WBPaper00064182 | ||||||||
| Method | Gene |
