WormBase Tree Display for Gene: WBGene00010106

WBGene00010106 SMap: S_parent: Sequence: F55C9
  Identity: Version: 2
    Name: CGC_name: fbxb-61 Person_evidence: WBPerson655
      Sequence_name: F55C9.10
      Molecular_name: F55C9.10
        F55C9.10.1
        CE18742
      Other_name: CELE_F55C9.10 Accession_evidence: NDB BX284605
      Public_name: fbxb-61
    DB_info: Database: AceView gene 5T775
        WormQTL gene WBGene00010106
        WormFlux gene WBGene00010106
        NDB locus_tag CELE_F55C9.10
        Panther gene CAEEL|WormBase=WBGene00010106|UniProtKB=Q9XUZ3
          family PTHR22899
        NCBI gene 186298
        RefSeq protein NM_075358.2
        TrEMBL UniProtAcc Q9XUZ3
        UniProt_GCRP UniProtAcc Q9XUZ3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-61
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (44)
    RNASeq_FPKM (74)
    Ortholog: WBGene00154903 Caenorhabditis brenneri From_analysis: OMA
      WBGene00041169 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00034924 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00089092 Caenorhabditis briggsae From_analysis: Inparanoid_8
      chrV_pilon.g17863 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (144)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalppappa; ABarappppa; and ABplapaaaa based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including methylmercuric chloride; indole; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55C9.10
    Corresponding_transcript: F55C9.10.1
    Associated_feature: WBsf647711
      WBsf647712
      WBsf647713
      WBsf662224
      WBsf1003209
      WBsf1021713
      WBsf233187
      WBsf233188
  Experimental_info: RNAi_result: WBRNAi00032871 Inferred_automatically: RNAi_primary
      WBRNAi00048481 Inferred_automatically: RNAi_primary
      WBRNAi00015715 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013741
      Expr1034417
      Expr1152271
      Expr2011662
      Expr2029901
    Microarray_results (18)
    Expression_cluster (101)
    Interaction (209)
  Map_info: Map: V Position: 21.0088 Error: 0.020837
    Positive: Positive_clone: F55C9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene