WormBase Tree Display for Gene: WBGene00010520
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| WBGene00010520 | SMap | S_parent | Sequence | K03A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cpx-2 | Person_evidence | WBPerson298 | |||||
| Sequence_name | K03A11.2 | ||||||||
| Molecular_name | K03A11.2 | ||||||||
| K03A11.2.1 | |||||||||
| CE06072 | |||||||||
| K03A11.2.2 | |||||||||
| Other_name | CELE_K03A11.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | cpx-2 | ||||||||
| DB_info | Database | AceView | gene | XN686 | |||||
| WormQTL | gene | WBGene00010520 | |||||||
| WormFlux | gene | WBGene00010520 | |||||||
| NDB | locus_tag | CELE_K03A11.2 | |||||||
| NCBI | gene | 186917 | |||||||
| RefSeq | protein | NM_001392868.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315172 | |||||||
| TrEMBL | UniProtAcc | Q21168 | |||||||
| UniProt_GCRP | UniProtAcc | Q21168 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Jul 2005 13:34:00 | WBPerson2970 | Name_change | CGC_name | cpx-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpx | ||||||||
| Allele (58) | |||||||||
| Strain | WBStrain00032120 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00070486 | ||||||||
| 00070487 | |||||||||
| 00117893 | |||||||||
| 00117894 | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00022271 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable syntaxin binding activity. Predicted to be involved in exocytosis and neurotransmitter transport. Expressed in head neurons and tail neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K03A11.2 | |||||||
| Corresponding_transcript | K03A11.2.1 | ||||||||
| K03A11.2.2 | |||||||||
| Other_sequence | Dviv_isotig09100 | ||||||||
| Associated_feature | WBsf671160 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00033904 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049785 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016508 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9192 | ||||||||
| Expr9230 | |||||||||
| Expr1010673 | |||||||||
| Expr1153500 | |||||||||
| Expr2010521 | |||||||||
| Expr2028761 | |||||||||
| Drives_construct | WBCnstr00013783 | ||||||||
| WBCnstr00013839 | |||||||||
| WBCnstr00031357 | |||||||||
| Construct_product | WBCnstr00013839 | ||||||||
| WBCnstr00031357 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (73) | |||||||||
| Interaction | WBInteraction000277591 | ||||||||
| WBInteraction000291689 | |||||||||
| WBInteraction000363244 | |||||||||
| WBInteraction000401765 | |||||||||
| WBInteraction000422940 | |||||||||
| WBInteraction000456951 | |||||||||
| WBInteraction000548381 | |||||||||
| Map_info | Map | X | Position | 9.85108 | Error | 0.127158 | |||
| Positive | Positive_clone | K03A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5332 | |||||||
| 4522 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030384 | ||||||||
| WBPaper00062594 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
