WormBase Tree Display for Gene: WBGene00010732
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| WBGene00010732 | SMap | S_parent | Sequence | K10C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K10C3.5 | |||||||
| Molecular_name | K10C3.5a | ||||||||
| K10C3.5a.1 | |||||||||
| CE32469 | |||||||||
| K10C3.5b | |||||||||
| CE38396 | |||||||||
| K10C3.5b.1 | |||||||||
| Other_name | CELE_K10C3.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | K10C3.5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (80) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031107 | ||||||||
| 00031108 | |||||||||
| 00031109 | |||||||||
| 00031110 | |||||||||
| 00031111 | |||||||||
| 00031112 | |||||||||
| 00118075 | |||||||||
| 00118076 | |||||||||
| Contained_in_operon | CEOP1566 | ||||||||
| Ortholog (35) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | K10C3.5 encodes, by alternative splicing, two isoforms of an ortholog of budding yeast Ria1p/Efl1p and human EFTUD1; by orthology with Ria1p, K10C3.5 is predicted to act in concert with W06E11.4 to recycle EIF-6 during during maturation of 60S ribosomal subunits; however, K10C3.5 has no obvious phenotype in mass RNAi assays. | Paper_evidence | WBPaper00032020 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 24 Jul 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable GTPase activity and ribosome binding activity. Predicted to be involved in cytosolic ribosome assembly. Predicted to be located in cytosol. Predicted to be part of ribonucleoprotein complex. Human ortholog(s) of this gene implicated in Shwachman-Diamond syndrome. Is an ortholog of human EFL1 (elongation factor like GTPase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060479 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25789) | ||||
| Molecular_info | Corresponding_CDS | K10C3.5a | |||||||
| K10C3.5b | |||||||||
| Corresponding_CDS_history | K10C3.5:wp90 | ||||||||
| Corresponding_transcript | K10C3.5a.1 | ||||||||
| K10C3.5b.1 | |||||||||
| Other_sequence (52) | |||||||||
| Associated_feature | WBsf656803 | ||||||||
| WBsf656804 | |||||||||
| WBsf656805 | |||||||||
| WBsf716669 | |||||||||
| WBsf218362 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034244 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050501 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062531 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019428 | ||||||||
| Expr1034699 | |||||||||
| Expr1154212 | |||||||||
| Expr2005019 | |||||||||
| Expr2023238 | |||||||||
| Drives_construct | WBCnstr00031187 | ||||||||
| Construct_product | WBCnstr00031187 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (133) | |||||||||
| Map_info | Positive | Positive_clone | K10C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 3.95948 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
