WormBase Tree Display for Gene: WBGene00010870
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| WBGene00010870 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | let-522 | Person_evidence | WBPerson533 | |||||
| Sequence_name | M05B5.2 | ||||||||
| Molecular_name | M05B5.2 | ||||||||
| M05B5.2.1 | |||||||||
| CE31044 | |||||||||
| Other_name | CELE_M05B5.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | let-522 | ||||||||
| DB_info | Database | AceView | gene | 1H748 | |||||
| WormQTL | gene | WBGene00010870 | |||||||
| WormFlux | gene | WBGene00010870 | |||||||
| NDB | locus_tag | CELE_M05B5.2 | |||||||
| NCBI | gene | 187451 | |||||||
| RefSeq | protein | NM_059628.6 | |||||||
| TrEMBL | UniProtAcc | Q21516 | |||||||
| UniProt_GCRP | UniProtAcc | Q21516 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 Mar 2015 11:46:49 | WBPerson2970 | Event | Acquires_merge | WBGene00002713 | ||||
| Name_change | CGC_name | let-522 | |||||||
| Acquires_merge | WBGene00002713 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | let | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00023858 | ||||||||
| WBStrain00037681 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00071988 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00017893 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M05B5.2 | |||||||
| Corresponding_CDS_history | M05B5.2:wp80 | ||||||||
| Corresponding_transcript | M05B5.2.1 | ||||||||
| Other_sequence (41) | |||||||||
| Associated_feature | WBsf664417 | ||||||||
| WBsf919610 | |||||||||
| WBsf919611 | |||||||||
| WBsf984112 | |||||||||
| WBsf219696 | |||||||||
| WBsf219697 | |||||||||
| WBsf219698 | |||||||||
| WBsf219699 | |||||||||
| WBsf219700 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr1797 | ||||||||
| Expr1013156 | |||||||||
| Expr1034763 | |||||||||
| Expr1154622 | |||||||||
| Expr2013063 | |||||||||
| Expr2031295 | |||||||||
| Drives_construct | WBCnstr00010453 | ||||||||
| WBCnstr00031095 | |||||||||
| Construct_product | WBCnstr00031095 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (209) | |||||||||
| Interaction | WBInteraction000260425 | ||||||||
| WBInteraction000314521 | |||||||||
| WBInteraction000416053 | |||||||||
| WBInteraction000439381 | |||||||||
| WBInteraction000520438 | |||||||||
| WBInteraction000524077 | |||||||||
| WBInteraction000557465 | |||||||||
| Map_info | Map | I | Position | 1.82249 | |||||
| Positive | Positive_clone | M05B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Pos_neg_data | 5382 | |||||||
| 5383 | |||||||||
| 5384 | |||||||||
| 5385 | |||||||||
| 6271 | |||||||||
| 6570 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001557 | ||||||||
| WBPaper00002829 | |||||||||
| WBPaper00003985 | |||||||||
| WBPaper00030456 | |||||||||
| WBPaper00036465 | |||||||||
| WBPaper00040589 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
