WormBase Tree Display for Gene: WBGene00010876
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| WBGene00010876 | SMap | S_parent | Sequence | M05D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | M05D6.3 | |||||||
| Molecular_name | M05D6.3 | ||||||||
| M05D6.3.1 | |||||||||
| CE03501 | |||||||||
| Other_name | CELE_M05D6.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | M05D6.3 | ||||||||
| DB_info | Database | AceView | gene | 2I767 | |||||
| WormQTL | gene | WBGene00010876 | |||||||
| WormFlux | gene | WBGene00010876 | |||||||
| NDB | locus_tag | CELE_M05D6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010876|UniProtKB=Q21522 | |||||||
| family | PTHR19134 | ||||||||
| NCBI | gene | 174355 | |||||||
| RefSeq | protein | NM_063388.4 | |||||||
| TrEMBL | UniProtAcc | Q21522 | |||||||
| UniProt_GCRP | UniProtAcc | Q21522 | |||||||
| OMIM | gene | 151460 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00071995 | ||||||||
| 00118201 | |||||||||
| 00118202 | |||||||||
| Ortholog (34) | |||||||||
| Paralog (67) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. Human ortholog(s) of this gene implicated in multiple sclerosis and severe combined immunodeficiency. Is an ortholog of human PTPRC (protein tyrosine phosphatase receptor type C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:627 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9666) | ||||
| DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9666) | ||||||
| DOID:2377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9666) | ||||||
| Molecular_info | Corresponding_CDS | M05D6.3 | |||||||
| Corresponding_transcript | M05D6.3.1 | ||||||||
| Other_sequence | Dviv_isotig08251 | ||||||||
| CR12513 | |||||||||
| CR12514 | |||||||||
| Dviv_isotig08250 | |||||||||
| Dviv_isotig08253 | |||||||||
| Dviv_isotig08249 | |||||||||
| Dviv_isotig08248 | |||||||||
| Dviv_isotig08252 | |||||||||
| Associated_feature | WBsf1012700 | ||||||||
| WBsf221754 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046285 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046286 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017192 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014296 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1034768 | ||||||||
| Expr1154630 | |||||||||
| Expr2005219 | |||||||||
| Expr2023437 | |||||||||
| Drives_construct | WBCnstr00031089 | ||||||||
| Construct_product | WBCnstr00031089 | ||||||||
| Microarray_results | SMD_M05D6.3 | ||||||||
| A_12_P133845 | |||||||||
| GPL3518_CE03501 | |||||||||
| GPL9450_M05D6.3 | |||||||||
| cea2.d.34234 | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | M05D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.813342 | |||||||
| Method | Gene |
