WormBase Tree Display for Gene: WBGene00010923

WBGene00010923 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 2
    Name: CGC_name: rle-1 Person_evidence: WBPerson5780
      Sequence_name: M142.6
      Molecular_name: M142.6a
        M142.6a.1
        CE45978
        M142.6b
        CE46027
        M142.6c
        CE46406
        M142.6b.1
        M142.6c.1
      Other_name: CELE_M142.6 Accession_evidence: NDB BX284603
      Public_name: rle-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 15 Dec 2006 15:03:44 WBPerson1847 Name_change: CGC_name: rle-1
    Status: Live
  Gene_info (11)
  Molecular_info: Corresponding_CDS: M142.6a
      M142.6b
      M142.6c
    Corresponding_CDS_history: M142.6:wp101
      M142.6:wp225
    Corresponding_transcript: M142.6a.1
      M142.6b.1
      M142.6c.1
    Other_sequence (43)
    Associated_feature: WBsf659555
      WBsf994198
      WBsf1015881
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr6426
      Expr16234
      Expr1021589
      Expr1034797
      Expr1154666
      Expr2015369
      Expr2033603
    Drives_construct: WBCnstr00003934
    Antibody: WBAntibody00001224
    Microarray_results (24)
    Expression_cluster: WBPaper00032528:L3_depleted
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00046012:tdp-1(ok803)_downregulated
      WBPaper00048910:mRNA-interacting_protein
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049626:UNC-75_target
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050412:cco-1(RNAi)_upregulated_N2
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051310:LIN-41_interacting
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055648:germline_expressed
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058958:100mGy-irradiation-72h_upregulated
      WBPaper00059174:MEG-3_interacting
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:Neuroblast_AVG_RIR
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:srj-42-srw-113
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064080:let-7_miRNA_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064871:hypoxia_upregulated_F1
      WBPaper00066110:Doxorubicin_downregulated_diploid
      WBPaper00032165:differentially_expressed_with_age_medoid_2
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00041174:environmental
      WBPaper00041174:environmental_prime
      WBPaper00056330:mrps-5(RNAi)_downregulated
    Interaction (21)
    WBProcess: WBbiopr:00000001
      WBbiopr:00000025
  Map_info: Map: III Position: 5.65494 Error: 0.023713
    Positive: Positive_clone: M142 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (16)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene