WormBase Tree Display for Gene: WBGene00010923
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| WBGene00010923 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rle-1 | Person_evidence | WBPerson5780 | |||||
| Sequence_name | M142.6 | ||||||||
| Molecular_name | M142.6a | ||||||||
| M142.6a.1 | |||||||||
| CE45978 | |||||||||
| M142.6b | |||||||||
| CE46027 | |||||||||
| M142.6c | |||||||||
| CE46406 | |||||||||
| M142.6b.1 | |||||||||
| M142.6c.1 | |||||||||
| Other_name | CELE_M142.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rle-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 15 Dec 2006 15:03:44 | WBPerson1847 | Name_change | CGC_name | rle-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rle | ||||||||
| Allele (253) | |||||||||
| Possibly_affected_by | WBVar02158441 | ||||||||
| Strain | WBStrain00003473 | ||||||||
| WBStrain00023467 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP3708 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00007976 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00016671 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enables ubiquitin-protein transferase activity. Involved in determination of adult lifespan; response to heat; and ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasmic stress granule. Expressed in several structures, including intestine. Is an ortholog of human RC3H1 (ring finger and CCCH-type domains 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M142.6a | |||||||
| M142.6b | |||||||||
| M142.6c | |||||||||
| Corresponding_CDS_history | M142.6:wp101 | ||||||||
| M142.6:wp225 | |||||||||
| Corresponding_transcript | M142.6a.1 | ||||||||
| M142.6b.1 | |||||||||
| M142.6c.1 | |||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf659555 | ||||||||
| WBsf994198 | |||||||||
| WBsf1015881 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr6426 | ||||||||
| Expr16234 | |||||||||
| Expr1021589 | |||||||||
| Expr1034797 | |||||||||
| Expr1154666 | |||||||||
| Expr2015369 | |||||||||
| Expr2033603 | |||||||||
| Drives_construct | WBCnstr00003934 | ||||||||
| Antibody | WBAntibody00001224 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction (21) | |||||||||
| WBProcess | WBbiopr:00000001 | ||||||||
| WBbiopr:00000025 | |||||||||
| Map_info | Map | III | Position | 5.65494 | Error | 0.023713 | |||
| Positive | Positive_clone | M142 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (16) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
