WormBase Tree Display for Gene: WBGene00011027
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| WBGene00011027 | SMap | S_parent | Sequence | R05D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R05D7.2 | |||||||
| Molecular_name | R05D7.2 | ||||||||
| R05D7.2.1 | |||||||||
| CE42146 | |||||||||
| Other_name | CELE_R05D7.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | R05D7.2 | ||||||||
| DB_info | Database | AceView | gene | 1M757 | |||||
| WormQTL | gene | WBGene00011027 | |||||||
| WormFlux | gene | WBGene00011027 | |||||||
| NDB | locus_tag | CELE_R05D7.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011027|UniProtKB=O45706 | |||||||
| family | PTHR23362 | ||||||||
| NCBI | gene | 187604 | |||||||
| RefSeq | protein | NM_060674.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322256 | |||||||
| TrEMBL | UniProtAcc | O45706 | |||||||
| UniProt_GCRP | UniProtAcc | O45706 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (89) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00039293 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00023828 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00161571 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00163092 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00147356 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00164680 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00036139 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WBGene00213993 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| chrI_pilon.g2417 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in XXXL; XXXR; germ line; somatic gonad precursor; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by twelve chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R05D7.2 | |||||||
| Corresponding_CDS_history | R05D7.2:wp187 | ||||||||
| Corresponding_transcript | R05D7.2.1 | ||||||||
| Associated_feature | WBsf985491 | ||||||||
| WBsf985492 | |||||||||
| WBsf985493 | |||||||||
| WBsf1010852 | |||||||||
| WBsf1010853 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004050 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051294 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012738 | ||||||||
| Expr1034832 | |||||||||
| Expr1154987 | |||||||||
| Expr2005395 | |||||||||
| Expr2023616 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Positive | Positive_clone | R05D7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 13.0712 | |||||||
| Method | Gene |
