WormBase Tree Display for Gene: WBGene00011030
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| WBGene00011030 | SMap | S_parent | Sequence | R05D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nsph-1.2 | Person_evidence | WBPerson18244 | |||||
| Sequence_name | R05D7.5 | ||||||||
| Molecular_name | R05D7.5a | ||||||||
| R05D7.5a.1 | |||||||||
| CE34492 | |||||||||
| R05D7.5b | |||||||||
| CE51777 | |||||||||
| R05D7.5c | |||||||||
| CE51765 | |||||||||
| R05D7.5b.1 | |||||||||
| R05D7.5c.1 | |||||||||
| Other_name | CELE_R05D7.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nsph-1.2 | ||||||||
| DB_info | Database | AceView | gene | 1M779 | |||||
| WormQTL | gene | WBGene00011030 | |||||||
| WormFlux | gene | WBGene00011030 | |||||||
| NDB | locus_tag | CELE_R05D7.5 | |||||||
| NCBI | gene | 173097 | |||||||
| RefSeq | protein | NM_001346624.3 | |||||||
| NM_060677.3 | |||||||||
| NM_001346623.3 | |||||||||
| TrEMBL | UniProtAcc | A0A1D3PCK8 | |||||||
| O45708 | |||||||||
| A0A1D3PDE4 | |||||||||
| UniProt_GCRP | UniProtAcc | O45708 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jul 2021 01:10:54 | WBPerson1983 | Name_change | CGC_name | nsph-1.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nsph | ||||||||
| Allele (141) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including Caaaaa; Caaaap; anterior hypodermis; germ line; and mc1 based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including pgl-1; lin-35; and lin-15B based on microarray and RNA-seq studies. Is affected by four chemicals including rotenone; Rifampin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Cytosolic motility protein. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R05D7.5a | |||||||
| R05D7.5b | |||||||||
| R05D7.5c | |||||||||
| Corresponding_CDS_history | R05D7.5:wp104 | ||||||||
| Corresponding_transcript | R05D7.5a.1 | ||||||||
| R05D7.5b.1 | |||||||||
| R05D7.5c.1 | |||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf643743 | ||||||||
| WBsf656959 | |||||||||
| WBsf656960 | |||||||||
| WBsf985501 | |||||||||
| WBsf985502 | |||||||||
| WBsf218578 | |||||||||
| WBsf218579 | |||||||||
| WBsf218580 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034608 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051297 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004052 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020222 | ||||||||
| Expr1034835 | |||||||||
| Expr1154990 | |||||||||
| Expr2005397 | |||||||||
| Expr2023618 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction | WBInteraction000362168 | ||||||||
| WBInteraction000404036 | |||||||||
| WBInteraction000457877 | |||||||||
| Map_info | Positive | Positive_clone | R05D7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 13.0718 | |||||||
| Method | Gene |
