WormBase Tree Display for Gene: WBGene00011058
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| WBGene00011058 | SMap | S_parent | Sequence | R06C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fdps-1 | Person_evidence | WBPerson222 | |||||
| Sequence_name | R06C1.2 | ||||||||
| Molecular_name | R06C1.2 | ||||||||
| R06C1.2.1 | |||||||||
| CE23901 | |||||||||
| Other_name | CELE_R06C1.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | fdps-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Jun 2010 10:25:58 | WBPerson2970 | Name_change | CGC_name | fdps-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fdps | ||||||||
| Allele (122) | |||||||||
| Strain | WBStrain00051243 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP1660 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable dimethylallyltranstransferase activity and geranyltranstransferase activity. Predicted to be involved in farnesyl diphosphate biosynthetic process. Predicted to be located in cytoplasm. Expressed in germ line. Human ortholog(s) of this gene implicated in porokeratosis. Is an ortholog of human FDPS (farnesyl diphosphate synthase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3805 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3631) | ||||
| Molecular_info | Corresponding_CDS | R06C1.2 | |||||||
| Corresponding_transcript | R06C1.2.1 | ||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf663780 | ||||||||
| WBsf981102 | |||||||||
| WBsf220381 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00110283 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051378 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110284 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116716 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110285 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4058 | ||||||||
| Expr1014918 | |||||||||
| Expr1034853 | |||||||||
| Expr1155068 | |||||||||
| Expr2011746 | |||||||||
| Expr2029984 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Map | I | Position | 13.0073 | Error | 0.001326 | |||
| Positive | Positive_clone | R06C1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064071 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
