WormBase Tree Display for Gene: WBGene00011113
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| WBGene00011113 | SMap | S_parent | Sequence | R07E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07E5.5 | |||||||
| Molecular_name | R07E5.5 | ||||||||
| R07E5.5.1 | |||||||||
| CE43503 | |||||||||
| Other_name | CELE_R07E5.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R07E5.5 | ||||||||
| DB_info | Database | AceView | gene | 3F487 | |||||
| WormQTL | gene | WBGene00011113 | |||||||
| WormFlux | gene | WBGene00011113 | |||||||
| NDB | locus_tag | CELE_R07E5.5 | |||||||
| NCBI | gene | 187681 | |||||||
| RefSeq | protein | NM_065486.3 | |||||||
| TrEMBL | UniProtAcc | Q21825 | |||||||
| UniProt_GCRP | UniProtAcc | Q21825 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3180 | ||||||||
| Ortholog | chrIII_pilon.g7439 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in AVA; Z1.p; Z4.a; male distal tip cell; and somatic gonad precursor based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including sodium arsenite; multi-walled carbon nanotube; and bisphenol A based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Zinc finger C2H2 superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07E5.5 | |||||||
| Corresponding_CDS_history | R07E5.5:wp200 | ||||||||
| Corresponding_transcript | R07E5.5.1 | ||||||||
| Associated_feature | WBsf978392 | ||||||||
| WBsf224728 | |||||||||
| Transcription_factor | WBTranscriptionFactor000841 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00017561 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103476 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051493 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006793 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014877 | ||||||||
| Expr1155173 | |||||||||
| Expr2005469 | |||||||||
| Expr2023690 | |||||||||
| Drives_construct | WBCnstr00030920 | ||||||||
| Construct_product | WBCnstr00030920 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (67) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | R07E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -3.17787 | |||||||
| Method | Gene |
