WormBase Tree Display for Gene: WBGene00011130
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| WBGene00011130 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | zip-6 | Person_evidence | WBPerson260 | |||||
| WBPerson460 | |||||||||
| Sequence_name | R07H5.10 | ||||||||
| Molecular_name | R07H5.10a | ||||||||
| R07H5.10a.1 | |||||||||
| CE44611 | |||||||||
| R07H5.10b | |||||||||
| CE44690 | |||||||||
| R07H5.10b.1 | |||||||||
| Other_name | CELE_R07H5.10 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | zip-6 | ||||||||
| DB_info | Database | AceView | gene | 4L978 | |||||
| WormQTL | gene | WBGene00011130 | |||||||
| WormFlux | gene | WBGene00011130 | |||||||
| NDB | locus_tag | CELE_R07H5.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011130|UniProtKB=G5EGQ7 | |||||||
| family | PTHR11988 | ||||||||
| NCBI | gene | 187691 | |||||||
| RefSeq | protein | NM_001268618.2 | |||||||
| NM_001268619.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF344219 | |||||||
| TrEMBL | UniProtAcc | G5EGQ7 | |||||||
| G5EFX5 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EGQ7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Sep 2011 16:44:07 | WBPerson2970 | Name_change | CGC_name | zip-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zip | ||||||||
| Allele (72) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00019036 | ||||||||
| 00019037 | |||||||||
| 00019038 | |||||||||
| 00019039 | |||||||||
| 00019040 | |||||||||
| 00118421 | |||||||||
| 00118422 | |||||||||
| 00118423 | |||||||||
| Ortholog | chrIV_pilon.g11800 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00000469 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00017535 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013100 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07H5.10a | |||||||
| R07H5.10b | |||||||||
| Corresponding_CDS_history | R07H5.10:wp57 | ||||||||
| R07H5.10:wp200 | |||||||||
| R07H5.10:wp212 | |||||||||
| Corresponding_transcript | R07H5.10a.1 | ||||||||
| R07H5.10b.1 | |||||||||
| Other_sequence | ES672465.1 | ||||||||
| DA01372 | |||||||||
| HC08993 | |||||||||
| Associated_feature | WBsf978768 | ||||||||
| WBsf997794 | |||||||||
| WBsf997795 | |||||||||
| WBsf230844 | |||||||||
| Transcription_factor | WBTranscriptionFactor000717 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00017568 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00107258 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051507 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7782 | ||||||||
| Expr1017748 | |||||||||
| Expr1155186 | |||||||||
| Expr2018160 | |||||||||
| Expr2036297 | |||||||||
| Drives_construct | WBCnstr00012927 | ||||||||
| WBCnstr00030907 | |||||||||
| Construct_product | WBCnstr00030907 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | IV | Position | 4.92571 | Error | 0.000721 | |||
| Positive | Positive_clone | R07H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
