WormBase Tree Display for Gene: WBGene00011241
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| WBGene00011241 | SMap | S_parent | Sequence | R11A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mpz-5 | Person_evidence | WBPerson260 | |||||
| Sequence_name | R11A8.8 | ||||||||
| Molecular_name | R11A8.8 | ||||||||
| R11A8.8.1 | |||||||||
| CE49913 | |||||||||
| Other_name | CELE_R11A8.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | mpz-5 | ||||||||
| DB_info | Database | AceView | gene | 4L136 | |||||
| WormQTL | gene | WBGene00011241 | |||||||
| WormFlux | gene | WBGene00011241 | |||||||
| NDB | locus_tag | CELE_R11A8.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011241|UniProtKB=Q7YWW5 | |||||||
| family | PTHR31327 | ||||||||
| NCBI | gene | 3565993 | |||||||
| RefSeq | protein | NM_001028170.3 | |||||||
| TREEFAM | TREEFAM_ID | TF343247 | |||||||
| TrEMBL | UniProtAcc | Q7YWW5 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YWW5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Feb 2012 16:30:56 | WBPerson2970 | Name_change | CGC_name | mpz-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mpz | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00055622 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Enriched in ALN; body wall muscle cell; germ line; mechanosensory neurons; and in male based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; Sodium Chloride; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Uncharacterized protein T15H9.4-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11A8.8 | |||||||
| Corresponding_CDS_history | R11A8.8:wp243 | ||||||||
| Corresponding_transcript | R11A8.8.1 | ||||||||
| Associated_feature | WBsf652129 | ||||||||
| WBsf668247 | |||||||||
| WBsf997605 | |||||||||
| WBsf997606 | |||||||||
| WBsf230727 | |||||||||
| Experimental_info | Expr_pattern | Expr1023972 | |||||||
| Expr1155434 | |||||||||
| Expr2013682 | |||||||||
| Expr2031916 | |||||||||
| Drives_construct | WBCnstr00030815 | ||||||||
| Construct_product | WBCnstr00030815 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | IV | Position | 4.57922 | |||||
| Positive | Positive_clone | R11A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
