WormBase Tree Display for Gene: WBGene00011280
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WBGene00011280 | SMap | S_parent | Sequence | R74 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pelo-1 | Person_evidence | WBPerson959 | |||||
Sequence_name | R74.6 | ||||||||
Molecular_name | R74.6 | ||||||||
R74.6.1 | |||||||||
CE01059 | |||||||||
Other_name | CELE_R74.6 | Accession_evidence | NDB | BX284603 | |||||
Public_name | pelo-1 | ||||||||
DB_info | Database | AceView | gene | 3F292 | |||||
WormQTL | gene | WBGene00011280 | |||||||
WormFlux | gene | WBGene00011280 | |||||||
NDB | locus_tag | CELE_R74.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011280|UniProtKB=P50444 | |||||||
family | PTHR10853 | ||||||||
NCBI | gene | 187888 | |||||||
RefSeq | protein | NM_065441.6 | |||||||
SwissProt | UniProtAcc | P50444 | |||||||
TREEFAM | TREEFAM_ID | TF105733 | |||||||
UniProt_GCRP | UniProtAcc | P50444 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 28 Feb 2017 08:21:36 | WBPerson2970 | Name_change | CGC_name | pelo-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pelo | ||||||||
Allele (17) | |||||||||
Strain | WBStrain00002763 | ||||||||
WBStrain00030562 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (53) | |||||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. Predicted to be involved in nonfunctional rRNA decay; nuclear-transcribed mRNA catabolic process, no-go decay; and ribosome disassembly. Predicted to be located in cytoplasm. Is an ortholog of human PELO (pelota mRNA surveillance and ribosome rescue factor). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R74.6 | |||||||
Corresponding_transcript | R74.6.1 | ||||||||
Other_sequence (45) | |||||||||
Associated_feature | WBsf650961 | ||||||||
WBsf666751 | |||||||||
WBsf666752 | |||||||||
WBsf226490 | |||||||||
Experimental_info | RNAi_result | WBRNAi00006931 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017920 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052053 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005284 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052052 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052054 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034979 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram299 | ||||||||
Expr6553 | |||||||||
Expr1011079 | |||||||||
Expr1155687 | |||||||||
Expr2014820 | |||||||||
Expr2033054 | |||||||||
Drives_construct | WBCnstr00003291 | ||||||||
WBCnstr00030782 | |||||||||
Construct_product | WBCnstr00030782 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (65) | |||||||||
Interaction (37) | |||||||||
Map_info | Map | III | Position | -3.67262 | |||||
Positive | Positive_clone | R74 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00041771 | |||||||||
WBPaper00053553 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064901 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |