WormBase Tree Display for Gene: WBGene00011287
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| WBGene00011287 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-24 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | R90.5 | ||||||||
| Molecular_name | R90.5a | ||||||||
| R90.5a.1 | |||||||||
| CE30683 | |||||||||
| R90.5b | |||||||||
| CE45382 | |||||||||
| R90.5c | |||||||||
| CE45305 | |||||||||
| R90.5b.1 | |||||||||
| R90.5c.1 | |||||||||
| Other_name | CELE_R90.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | glb-24 | ||||||||
| DB_info | Database | AceView | gene | 5N362 | |||||
| WormQTL | gene | WBGene00011287 | |||||||
| WormFlux | gene | WBGene00011287 | |||||||
| NDB | locus_tag | CELE_R90.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011287|UniProtKB=Q8MPY8 | |||||||
| family | PTHR46458 | ||||||||
| NCBI | gene | 179767 | |||||||
| RefSeq | protein | NM_001269535.3 | |||||||
| NM_001269533.3 | |||||||||
| NM_001269534.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF353116 | |||||||
| TrEMBL | UniProtAcc | E1B6T1 | |||||||
| Q8MPY8 | |||||||||
| E1B6T2 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MPY8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Oct 2007 15:16:42 | WBPerson2970 | Name_change | CGC_name | glb-24 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008078 | ||||||||
| 00008079 | |||||||||
| 00008080 | |||||||||
| 00008081 | |||||||||
| 00118548 | |||||||||
| 00118549 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | glb-24 encodes a globin; glb-24 transcription is higher in L3 and dauers than in young adults; glb-24 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | |||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R90.5a | |||||||
| R90.5b | |||||||||
| R90.5c | |||||||||
| Corresponding_transcript | R90.5a.1 | ||||||||
| R90.5b.1 | |||||||||
| R90.5c.1 | |||||||||
| Other_sequence | BXC02800_1 | ||||||||
| JI218123.1 | |||||||||
| Associated_feature | WBsf669533 | ||||||||
| WBsf1001657 | |||||||||
| WBsf234735 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052061 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr4890 | ||||||||
| Expr8504 | |||||||||
| Expr1010536 | |||||||||
| Expr1034961 | |||||||||
| Expr1155694 | |||||||||
| Expr2012060 | |||||||||
| Expr2030296 | |||||||||
| Drives_construct | WBCnstr00013333 | ||||||||
| WBCnstr00030775 | |||||||||
| Construct_product | WBCnstr00030775 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (129) | |||||||||
| Map_info | Map | V | Position | 4.72232 | Error | 0.000679 | |||
| Positive | Positive_clone | R90 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| WBPaper00032254 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
