WormBase Tree Display for Gene: WBGene00011872
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| WBGene00011872 | SMap | S_parent | Sequence | T20G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | blos-1 | Person_evidence | WBPerson253 | |||||
| Sequence_name | T20G5.10 | ||||||||
| Molecular_name | T20G5.10 | ||||||||
| T20G5.10.1 | |||||||||
| CE51581 | |||||||||
| Other_name | CELE_T20G5.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | blos-1 | ||||||||
| DB_info | Database | AceView | gene | 3L300 | |||||
| WormQTL | gene | WBGene00011872 | |||||||
| WormFlux | gene | WBGene00011872 | |||||||
| NDB | locus_tag | CELE_T20G5.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011872|UniProtKB=Q22616 | |||||||
| family | PTHR13073 | ||||||||
| NCBI | gene | 176435 | |||||||
| RefSeq | protein | NM_066861.5 | |||||||
| SwissProt | UniProtAcc | Q22616 | |||||||
| TREEFAM | TREEFAM_ID | TF314443 | |||||||
| UniProt_GCRP | UniProtAcc | Q22616 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2012 11:56:39 | WBPerson2970 | Name_change | CGC_name | blos-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | blos | ||||||||
| Allele (16) | |||||||||
| Strain | WBStrain00037623 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP3660 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Involved in endosomal transport. Predicted to be located in cytosol; mitochondrial intermembrane space; and mitochondrial matrix. Predicted to be part of BLOC-1 complex. Expressed in excretory cell; intestine; and nervous system. Is an ortholog of human BLOC1S1 (biogenesis of lysosomal organelles complex 1 subunit 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20G5.10 | |||||||
| Corresponding_CDS_history | T20G5.10:wp253 | ||||||||
| Corresponding_transcript | T20G5.10.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf651447 | ||||||||
| WBsf651448 | |||||||||
| WBsf227420 | |||||||||
| WBsf227421 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053657 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035720 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006761 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7670 | ||||||||
| Expr7976 | |||||||||
| Expr1023322 | |||||||||
| Expr1035232 | |||||||||
| Expr1157212 | |||||||||
| Expr2009634 | |||||||||
| Expr2027873 | |||||||||
| Drives_construct | WBCnstr00012815 | ||||||||
| WBCnstr00013040 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | III | Position | 2.01441 | |||||
| Positive | Positive_clone | T20G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031532 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00052655 | |||||||||
| WBPaper00052935 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064980 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
