WormBase Tree Display for Gene: WBGene00011964
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| WBGene00011964 | SMap | S_parent | Sequence | T23G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | saeg-2 | Paper_evidence | WBPaper00038421 | |||||
| Person_evidence | WBPerson2754 | ||||||||
| Sequence_name | T23G5.6 | ||||||||
| Molecular_name | T23G5.6 | ||||||||
| T23G5.6.1 | |||||||||
| CE37794 | |||||||||
| Other_name | CELE_T23G5.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | saeg-2 | ||||||||
| DB_info | Database | AceView | gene | 3K331 | |||||
| WormQTL | gene | WBGene00011964 | |||||||
| WormFlux | gene | WBGene00011964 | |||||||
| NDB | locus_tag | CELE_T23G5.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011964|UniProtKB=Q03615 | |||||||
| family | PTHR23399 | ||||||||
| NCBI | gene | 176303 | |||||||
| RefSeq | protein | NM_066641.7 | |||||||
| SwissProt | UniProtAcc | Q03615 | |||||||
| TREEFAM | TREEFAM_ID | TF321646 | |||||||
| UniProt_GCRP | UniProtAcc | Q03615 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 May 2011 10:23:08 | WBPerson2970 | Name_change | CGC_name | saeg-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | saeg | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00033014 | ||||||||
| WBStrain00040199 | |||||||||
| WBStrain00034734 | |||||||||
| WBStrain00047507 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00052599 | ||||||||
| 00052600 | |||||||||
| 00052601 | |||||||||
| 00052602 | |||||||||
| 00052603 | |||||||||
| 00052604 | |||||||||
| 00052605 | |||||||||
| 00119166 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and nucleosome binding activity. Located in nucleus. Is an ortholog of human DNTTIP1 (deoxynucleotidyltransferase terminal interacting protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T23G5.6 | |||||||
| Corresponding_CDS_history | T23G5.6:wp135 | ||||||||
| Corresponding_transcript | T23G5.6.1 | ||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf645469 | ||||||||
| WBsf645470 | |||||||||
| WBsf659395 | |||||||||
| WBsf993620 | |||||||||
| WBsf993621 | |||||||||
| WBsf993622 | |||||||||
| WBsf1015571 | |||||||||
| WBsf225536 | |||||||||
| Transcription_factor | WBTranscriptionFactor001069 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019107 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00064082 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035890 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006436 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053979 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10442 | ||||||||
| Expr10443 | |||||||||
| Expr1025170 | |||||||||
| Expr1035282 | |||||||||
| Expr1157525 | |||||||||
| Expr1200187 | |||||||||
| Expr2015580 | |||||||||
| Expr2033815 | |||||||||
| Drives_construct | WBCnstr00015332 | ||||||||
| WBCnstr00030245 | |||||||||
| Construct_product | WBCnstr00030245 | ||||||||
| Antibody | WBAntibody00002236 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | III | Position | 0.344537 | Error | 0.007522 | |||
| Positive | Positive_clone | T23G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005736 | ||||||||
| WBPaper00021920 | |||||||||
| WBPaper00031477 | |||||||||
| WBPaper00038421 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056867 | |||||||||
| WBPaper00065199 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
