WormBase Tree Display for Gene: WBGene00012114
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| WBGene00012114 | SMap | S_parent | Sequence | T28B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | T28B8.3 | |||||||
| Molecular_name | T28B8.3a | ||||||||
| T28B8.3a.1 | |||||||||
| CE53941 | |||||||||
| T28B8.3b | |||||||||
| CE42177 | |||||||||
| T28B8.3b.1 | |||||||||
| Other_name | CELE_T28B8.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T28B8.3 | ||||||||
| DB_info | Database | AceView | gene | 1I735 | |||||
| WormQTL | gene | WBGene00012114 | |||||||
| WormFlux | gene | WBGene00012114 | |||||||
| NDB | locus_tag | CELE_T28B8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012114|UniProtKB=P91834 | |||||||
| family | PTHR32170 | ||||||||
| NCBI | gene | 189032 | |||||||
| RefSeq | protein | NM_001047228.2 | |||||||
| NM_001377608.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF106237 | |||||||
| TrEMBL | UniProtAcc | P91834 | |||||||
| Q1ZXS9 | |||||||||
| UniProt_GCRP | UniProtAcc | P91834 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Feb 2005 13:32:58 | WBPerson1847 | Event | Split_into | WBGene00044122 | ||||
| Split_into | WBGene00044122 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (88) | |||||||||
| Strain | WBStrain00032379 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00051357 | ||||||||
| 00051358 | |||||||||
| 00051359 | |||||||||
| 00051360 | |||||||||
| 00051361 | |||||||||
| 00051362 | |||||||||
| 00066758 | |||||||||
| 00119297 | |||||||||
| 00119298 | |||||||||
| 00119299 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00007588 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012115 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable lysine-acetylated histone binding activity; peptidase activator activity; and proteasome binding activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process. Predicted to be located in cytosol and nucleus. Predicted to be part of proteasome complex. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28B8.3a | |||||||
| T28B8.3b | |||||||||
| Corresponding_CDS_history | T28B8.3:wp140 | ||||||||
| T28B8.3a:wp187 | |||||||||
| T28B8.3a:wp274 | |||||||||
| T28B8.3b:wp187 | |||||||||
| Corresponding_transcript | T28B8.3a.1 | ||||||||
| T28B8.3b.1 | |||||||||
| Other_sequence | FG588156.1 | ||||||||
| Associated_feature | WBsf984358 | ||||||||
| WBsf1010194 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004335 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054384 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019966 | ||||||||
| Expr1157932 | |||||||||
| Expr2006600 | |||||||||
| Expr2024817 | |||||||||
| Drives_construct | WBCnstr00030128 | ||||||||
| Construct_product | WBCnstr00030128 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (70) | |||||||||
| SAGE_tag (13) | |||||||||
| Interaction | WBInteraction000585332 | ||||||||
| Map_info | Positive | Positive_clone | T28B8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 2.60493 | |||||||
| Reference | WBPaper00055090 | ||||||||
| Method | Gene |
