WormBase Tree Display for Gene: WBGene00012234
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| WBGene00012234 | SMap | S_parent | Sequence | W04A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ints-4 | Person_evidence | WBPerson6532 | |||||
| Sequence_name | W04A4.5 | ||||||||
| Molecular_name | W04A4.5 | ||||||||
| W04A4.5.1 | |||||||||
| CE25138 | |||||||||
| Other_name | CELE_W04A4.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ints-4 | ||||||||
| DB_info | Database | AceView | gene | 1O265 | |||||
| WormQTL | gene | WBGene00012234 | |||||||
| WormFlux | gene | WBGene00012234 | |||||||
| NDB | locus_tag | CELE_W04A4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012234|UniProtKB=O18167 | |||||||
| family | PTHR20938 | ||||||||
| NCBI | gene | 173238 | |||||||
| RefSeq | protein | NM_060995.9 | |||||||
| TREEFAM | TREEFAM_ID | TF315047 | |||||||
| TrEMBL | UniProtAcc | O18167 | |||||||
| UniProt_GCRP | UniProtAcc | O18167 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 06 Feb 2019 16:53:24 | WBPerson1983 | Name_change | CGC_name | ints-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ints | ||||||||
| Allele (180) | |||||||||
| Strain | WBStrain00051131 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031489 | ||||||||
| 00031490 | |||||||||
| 00031491 | |||||||||
| 00031492 | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in snRNA processing. Predicted to be part of integrator complex. Is an ortholog of human INTS4 (integrator complex subunit 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W04A4.5 | |||||||
| Corresponding_transcript | W04A4.5.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern | Expr1013384 | ||||||||
| Expr1035416 | |||||||||
| Expr1158279 | |||||||||
| Expr2006753 | |||||||||
| Expr2024974 | |||||||||
| Drives_construct | WBCnstr00030055 | ||||||||
| Construct_product | WBCnstr00030055 | ||||||||
| Regulate_expr_cluster | WBPaper00056284:ints-4(RNAi)_downregulated | ||||||||
| WBPaper00056284:ints-4(RNAi)_upregulated | |||||||||
| WBPaper00057068:ints-4(RNAi)_downregulated | |||||||||
| WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium | |||||||||
| WBPaper00057068:ints-4(RNAi)_upregulated | |||||||||
| WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | I | Position | 21.6372 | |||||
| Positive | Positive_clone | W04A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056284 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
