WormBase Tree Display for Gene: WBGene00012399
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| WBGene00012399 | SMap | S_parent | Sequence | Y6E2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y6E2A.5 | |||||||
| Molecular_name | Y6E2A.5 | ||||||||
| Y6E2A.5.1 | |||||||||
| CE41599 | |||||||||
| Other_name | CELE_Y6E2A.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y6E2A.5 | ||||||||
| DB_info | Database | AceView | gene | 5Q196 | |||||
| WormQTL | gene | WBGene00012399 | |||||||
| WormFlux | gene | WBGene00012399 | |||||||
| NDB | locus_tag | CELE_Y6E2A.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012399|UniProtKB=Q9XXT8 | |||||||
| family | PTHR21566 | ||||||||
| NCBI | gene | 189376 | |||||||
| RefSeq | protein | NM_074510.4 | |||||||
| TREEFAM | TREEFAM_ID | TF319424 | |||||||
| TrEMBL | UniProtAcc | Q9XXT8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XXT8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Paralog | WBGene00010004 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WBGene00010508 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012381 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012398 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015223 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00022549 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00022547 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00022548 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00012400 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015221 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in several structures, including head mesodermal cell; male distal tip cell; neurons; retrovesicular ganglion; and somatic gonad precursor based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including multi-walled carbon nanotube; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF713 and Protein of unknown function (DUF713). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y6E2A.5 | |||||||
| Corresponding_CDS_history | Y6E2A.5:wp182 | ||||||||
| Corresponding_transcript | Y6E2A.5.1 | ||||||||
| Associated_feature | WBsf1002338 | ||||||||
| WBsf1021054 | |||||||||
| WBsf021423 | |||||||||
| WBsf235081 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037749 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058105 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027302 | ||||||||
| Expr1161517 | |||||||||
| Expr2008252 | |||||||||
| Expr2026495 | |||||||||
| Drives_construct | WBCnstr00029972 | ||||||||
| Construct_product | WBCnstr00029972 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (212) | |||||||||
| Interaction | WBInteraction000269495 | ||||||||
| WBInteraction000290856 | |||||||||
| WBInteraction000303482 | |||||||||
| WBInteraction000322131 | |||||||||
| WBInteraction000380628 | |||||||||
| WBInteraction000387037 | |||||||||
| WBInteraction000424467 | |||||||||
| WBInteraction000439937 | |||||||||
| WBInteraction000459528 | |||||||||
| Map_info | Positive | Positive_clone | Y6E2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 8.67805 | |||||||
| Method | Gene |
