WormBase Tree Display for Gene: WBGene00012405

WBGene00012405 SMap: S_parent: Sequence: Y6G8
  Identity: Version: 2
    Name: CGC_name: ztf-25 Person_evidence: WBPerson1997
      Sequence_name: Y6G8.3
      Molecular_name: Y6G8.3
        Y6G8.3.1
        CE14840
      Other_name: CELE_Y6G8.3 Accession_evidence: NDB BX284605
      Public_name: ztf-25
    DB_info: Database: AceView gene 5S83
        WormQTL gene WBGene00012405
        WormFlux gene WBGene00012405
        NDB locus_tag CELE_Y6G8.3
        Panther gene CAEEL|WormBase=WBGene00012405|UniProtKB=O01709
          family PTHR24408
        NCBI gene 180158
        RefSeq protein NM_075055.8
        TREEFAM TREEFAM_ID TF317235
        TrEMBL UniProtAcc O01709
        UniProt_GCRP UniProtAcc O01709
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 Apr 2008 09:32:24 WBPerson2970 Name_change: CGC_name: ztf-25
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ztf
    Allele (61)
    Strain: WBStrain00051023
    RNASeq_FPKM (74)
    GO_annotation: 00025390
      00025391
      00025392
      00025393
      00025394
    Ortholog (66)
    Paralog: WBGene00001324 Caenorhabditis elegans From_analysis: Panther
      WBGene00001821 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00009834 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00011505 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00018099 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00015523 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00013438 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00014131 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00021387 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in embryonic cell; head muscle; intestine; and somatic nervous system. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y6G8.3
    Corresponding_transcript: Y6G8.3.1
    Other_sequence: JI461381.1
    Associated_feature: WBsf647662
      WBsf1002700
      WBsf1021315
      WBsf233148
    Transcription_factor: WBTranscriptionFactor000267
  Experimental_info: RNAi_result: WBRNAi00021353 Inferred_automatically: RNAi_primary
      WBRNAi00061946 Inferred_automatically: RNAi_primary
      WBRNAi00115845 Inferred_automatically: RNAi_primary
      WBRNAi00115882 Inferred_automatically: RNAi_primary
      WBRNAi00058113 Inferred_automatically: RNAi_primary
      WBRNAi00037752 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7739
      Expr11403
      Expr1012566
      Expr1035496
      Expr1161526
      Expr2018196
      Expr2036333
    Drives_construct: WBCnstr00012884
      WBCnstr00014681
      WBCnstr00014682
      WBCnstr00014683
    Construct_product: WBCnstr00016525
      WBCnstr00016550
    Microarray_results (17)
    Expression_cluster (162)
    Interaction (75)
  Map_info: Map: V Position: 12.9276 Error: 0.001206
    Positive: Positive_clone: Y6G8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00038390
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene