WormBase Tree Display for Gene: WBGene00012480
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WBGene00012480 | SMap | S_parent | Sequence | Y18D10A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-104 | Person_evidence | WBPerson2531 | |||||
Sequence_name | Y18D10A.10 | ||||||||
Molecular_name | Y18D10A.10 | ||||||||
Y18D10A.10.1 | |||||||||
CE21406 | |||||||||
Other_name | CELE_Y18D10A.10 | Accession_evidence | NDB | BX284601 | |||||
Public_name | clec-104 | ||||||||
DB_info | Database | AceView | gene | 1N451 | |||||
WormQTL | gene | WBGene00012480 | |||||||
WormFlux | gene | WBGene00012480 | |||||||
NDB | locus_tag | CELE_Y18D10A.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012480|UniProtKB=Q9XW21 | |||||||
family | PTHR23124 | ||||||||
NCBI | gene | 189475 | |||||||
RefSeq | protein | NM_060847.3 | |||||||
TREEFAM | TREEFAM_ID | TF315870 | |||||||
TrEMBL | UniProtAcc | Q9XW21 | |||||||
UniProt_GCRP | UniProtAcc | Q9XW21 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-104 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (44) | |||||||||
Strain | WBStrain00032101 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (43) | |||||||||
Paralog (126) | |||||||||
Structured_description | Automated_description | Enriched in ABalppappa and ABarappppa based on single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and rrf-3 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by nine chemicals including multi-walled carbon nanotube; Alovudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y18D10A.10 | |||||||
Corresponding_transcript | Y18D10A.10.1 | ||||||||
Associated_feature | WBsf985709 | ||||||||
WBsf985710 | |||||||||
WBsf1010979 | |||||||||
WBsf1010980 | |||||||||
Experimental_info | RNAi_result | WBRNAi00036689 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055605 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004534 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022184 | ||||||||
Expr1035529 | |||||||||
Expr1159112 | |||||||||
Expr2010051 | |||||||||
Expr2028292 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (82) | |||||||||
Interaction (65) | |||||||||
Map_info | Map | I | Position | 14.1507 | Error | 0.002676 | |||
Positive | Positive_clone | Y18D10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |