WormBase Tree Display for Gene: WBGene00012502
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| WBGene00012502 | SMap | S_parent | Sequence | Y26D4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-107 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y26D4A.4 | ||||||||
| Molecular_name | Y26D4A.4a | ||||||||
| Y26D4A.4a.1 | |||||||||
| CE39647 | |||||||||
| Y26D4A.4b | |||||||||
| CE21485 | |||||||||
| Y26D4A.4b.1 | |||||||||
| Other_name | CELE_Y26D4A.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clec-107 | ||||||||
| DB_info | Database | AceView | gene | 1N662 | |||||
| WormQTL | gene | WBGene00012502 | |||||||
| WormFlux | gene | WBGene00012502 | |||||||
| NDB | locus_tag | CELE_Y26D4A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012502|UniProtKB=M1ZJ53 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 189545 | |||||||
| RefSeq | protein | NM_060885.7 | |||||||
| NM_001306530.3 | |||||||||
| TrEMBL | UniProtAcc | M1ZJ53 | |||||||
| Q9U2Q3 | |||||||||
| UniProt_GCRP | UniProtAcc | M1ZJ53 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-107 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (114) | |||||||||
| Structured_description | Automated_description | Enriched in NSM and in male based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; PAN-like domain; PAN-3 domain; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y26D4A.4a | |||||||
| Y26D4A.4b | |||||||||
| Corresponding_CDS_history | Y26D4A.4:wp153 | ||||||||
| Corresponding_transcript | Y26D4A.4a.1 | ||||||||
| Y26D4A.4b.1 | |||||||||
| Associated_feature | WBsf985772 | ||||||||
| WBsf220474 | |||||||||
| WBsf220475 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004570 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055748 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036742 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017832 | ||||||||
| Expr1159270 | |||||||||
| Expr2010053 | |||||||||
| Drives_construct | WBCnstr00029940 | ||||||||
| Construct_product | WBCnstr00029940 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (59) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | I | Position | 17.198 | Error | 0.009188 | |||
| Positive | Positive_clone | Y26D4A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
