WormBase Tree Display for Gene: WBGene00012524
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| WBGene00012524 | SMap | S_parent | Sequence | Y32B12B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y32B12B.4 | |||||||
| Molecular_name | Y32B12B.4a | ||||||||
| Y32B12B.4a.1 | |||||||||
| CE40153 | |||||||||
| Y32B12B.4b | |||||||||
| CE45735 | |||||||||
| Y32B12B.4c | |||||||||
| CE45720 | |||||||||
| Y32B12B.4b.1 | |||||||||
| Y32B12B.4c.1 | |||||||||
| Other_name | CELE_Y32B12B.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y32B12B.4 | ||||||||
| DB_info | Database | AceView | gene | 5R43 | |||||
| WormQTL | gene | WBGene00012524 | |||||||
| WormFlux | gene | WBGene00012524 | |||||||
| NDB | locus_tag | CELE_Y32B12B.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012524|UniProtKB=Q9XX31 | |||||||
| family | PTHR22716 | ||||||||
| NCBI | gene | 180110 | |||||||
| RefSeq | protein | NM_001269787.3 | |||||||
| NM_001269788.3 | |||||||||
| NM_001269786.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF332774 | |||||||
| TrEMBL | UniProtAcc | E8MDV5 | |||||||
| Q9XX31 | |||||||||
| E8MDV4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XX31 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (311) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00119614 | ||||||||
| Contained_in_operon | CEOP5576 | ||||||||
| Ortholog | WBGene00042200 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
| CSP38.g8523 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_V.g21142 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17188 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00002148 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009728 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009788 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00023497 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00014040 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017606 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017607 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022067 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | Y32B12B.4 encodes a protein with a THAP or THAP-like domain; otherproteins with such domains include LIN-15A, LIN-15B, LIN-36, and HIM-17(which all interact with LIN-35/Rb), as well as CDC-14B, CTB-1, GON-14,and ~100 other proteins such as Drosophila P element transposase andhuman nuclear proapoptotic factor THAP1. | Paper_evidence | WBPaper00025108 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 08 May 2007 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in negative regulation of vulval development. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y32B12B.4a | |||||||
| Y32B12B.4b | |||||||||
| Y32B12B.4c | |||||||||
| Corresponding_CDS_history | Y32B12B.4:wp156 | ||||||||
| Corresponding_transcript | Y32B12B.4a.1 | ||||||||
| Y32B12B.4b.1 | |||||||||
| Y32B12B.4c.1 | |||||||||
| Other_sequence | MC01440 | ||||||||
| AS16692 | |||||||||
| Associated_feature | WBsf662161 | ||||||||
| WBsf1002476 | |||||||||
| WBsf1021154 | |||||||||
| WBsf233119 | |||||||||
| WBsf233120 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062423 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000708 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055775 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020168 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036751 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012825 | ||||||||
| Expr1035541 | |||||||||
| Expr1159307 | |||||||||
| Expr2007199 | |||||||||
| Expr2025431 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | Y32B12B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 10.3327 | |||||||
| Method | Gene |
