WormBase Tree Display for Gene: WBGene00012578
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| WBGene00012578 | SMap | S_parent | Sequence | Y37H9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ccct-1 | Person_evidence | WBPerson10010 | |||||
| WBPerson10503 | |||||||||
| Sequence_name | Y37H9A.3 | ||||||||
| Molecular_name | Y37H9A.3 | ||||||||
| Y37H9A.3.1 | |||||||||
| CE53023 | |||||||||
| Other_name | CELE_Y37H9A.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ccct-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jan 2021 22:55:32 | WBPerson1983 | Name_change | CGC_name | ccct-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ccct | ||||||||
| Allele (222) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099453 | ||||||||
| 00099454 | |||||||||
| 00099455 | |||||||||
| 00099456 | |||||||||
| 00099457 | |||||||||
| 00119651 | |||||||||
| Contained_in_operon | CEOP1933 | ||||||||
| Ortholog (45) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 3. Is an ortholog of human CC2D1B (coiled-coil and C2 domain containing 1B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081179 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30237) | ||||
| DOID:1059 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30237) | ||||||
| Molecular_info | Corresponding_CDS | Y37H9A.3 | |||||||
| Corresponding_CDS_history | Y37H9A.3:wp132 | ||||||||
| Y37H9A.3:wp270 | |||||||||
| Corresponding_transcript | Y37H9A.3.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036819 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00073347 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055966 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022476 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014294 | ||||||||
| Expr1035567 | |||||||||
| Expr1159485 | |||||||||
| Expr2007284 | |||||||||
| Expr2025517 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction | WBInteraction000030883 | ||||||||
| WBInteraction000515587 | |||||||||
| WBInteraction000547696 | |||||||||
| WBInteraction000548340 | |||||||||
| WBInteraction000548581 | |||||||||
| WBInteraction000548636 | |||||||||
| WBInteraction000560979 | |||||||||
| WBInteraction000579223 | |||||||||
| WBInteraction000579224 | |||||||||
| Map_info | Map | I | Position | 21.6609 | |||||
| Positive | Positive_clone | Y37H9A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
