WormBase Tree Display for Gene: WBGene00012661

WBGene00012661 SMap: S_parent: Sequence: Y39A1B
  Identity: Version: 2
    Name: CGC_name: clec-163 Person_evidence: WBPerson2531
      Sequence_name: Y39A1B.1
      Molecular_name: Y39A1B.1
        Y39A1B.1.1
        CE19143
      Other_name: CELE_Y39A1B.1 Accession_evidence: NDB BX284603
      Public_name: clec-163
    DB_info: Database: AceView gene 3L881
        WormQTL gene WBGene00012661
        WormFlux gene WBGene00012661
        NDB locus_tag CELE_Y39A1B.1
        Panther gene CAEEL|WormBase=WBGene00012661|UniProtKB=Q9XXS0
          family PTHR31024
        NCBI gene 189714
        RefSeq protein NM_066980.1
        TREEFAM TREEFAM_ID TF317104
        TrEMBL UniProtAcc Q9XXS0
        UniProt_GCRP UniProtAcc Q9XXS0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-163
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (35)
    RNASeq_FPKM (74)
    Ortholog (66)
    Paralog (13)
    Structured_description: Automated_description: Is affected by several genes including eat-2; npr-1; and nhr-49 based on microarray; RNA-seq; and tiling array studies. Is affected by six chemicals including Mercuric Chloride; Tunicamycin; and tert-Butylhydroperoxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: von Willebrand factor, type A; C-type lectin fold; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; Lectin C-type domain; C-type lectin-like/link domain superfamily; Phosphorylation site; and C-type lectin-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y39A1B.1
    Corresponding_transcript: Y39A1B.1.1
    Other_sequence: CBC06495_1
    Associated_feature: WBsf645582
      WBsf994149
      WBsf1015854
  Experimental_info: RNAi_result: WBRNAi00098906 Inferred_automatically: RNAi_primary
      WBRNAi00056123 Inferred_automatically: RNAi_primary
      WBRNAi00020349 Inferred_automatically: RNAi_primary
      WBRNAi00036890 Inferred_automatically: RNAi_primary
      WBRNAi00006242 Inferred_automatically: RNAi_primary
      WBRNAi00102076 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027642
      Expr1159637
      Expr2010087
      Expr2028329
    Drives_construct: WBCnstr00029867
    Construct_product: WBCnstr00029867
    Microarray_results (18)
    Expression_cluster (47)
    Interaction: WBInteraction000140183
      WBInteraction000207967
      WBInteraction000233240
      WBInteraction000259286
      WBInteraction000273766
      WBInteraction000284187
      WBInteraction000353611
      WBInteraction000407670
  Map_info: Map: III Position: 5.39545 Error: 0.006864
    Positive: Positive_clone: Y39A1B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031002
    WBPaper00031686
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene