WormBase Tree Display for Gene: WBGene00012662
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| WBGene00012662 | SMap | S_parent | Sequence | Y39A1C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y39A1C.1 | |||||||
| Molecular_name | Y39A1C.1 | ||||||||
| Y39A1C.1.1 | |||||||||
| CE19146 | |||||||||
| Y39A1C.1.2 | |||||||||
| Other_name | CELE_Y39A1C.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y39A1C.1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (74) | |||||||||
| Strain | WBStrain00002461 | ||||||||
| WBStrain00037260 | |||||||||
| WBStrain00037601 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00104329 | ||||||||
| 00104330 | |||||||||
| 00104331 | |||||||||
| Contained_in_operon | CEOP3704 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Located in striated muscle dense body. Expressed in nerve ring. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 6 and sensorineural hearing loss. Is an ortholog of human TMIE (transmembrane inner ear). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10003 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30800) | ||||
| DOID:0110512 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30800) | ||||||
| Molecular_info | Corresponding_CDS | Y39A1C.1 | |||||||
| Corresponding_transcript | Y39A1C.1.1 | ||||||||
| Y39A1C.1.2 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf716555 | ||||||||
| WBsf994172 | |||||||||
| WBsf994173 | |||||||||
| WBsf1015870 | |||||||||
| WBsf225769 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036893 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056127 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109815 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020351 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109674 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109721 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006850 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109768 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6944 | ||||||||
| Expr9400 | |||||||||
| Expr13609 | |||||||||
| Expr1013789 | |||||||||
| Expr1035597 | |||||||||
| Expr1159640 | |||||||||
| Expr2007350 | |||||||||
| Expr2025585 | |||||||||
| Drives_construct | WBCnstr00003058 | ||||||||
| Construct_product | WBCnstr00013965 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction | WBInteraction000231939 | ||||||||
| WBInteraction000270736 | |||||||||
| WBInteraction000579210 | |||||||||
| WBInteraction000579214 | |||||||||
| Map_info | Positive | Positive_clone | Y39A1C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 5.45626 | |||||||
| Reference | WBPaper00038444 | ||||||||
| Method | Gene |
