WormBase Tree Display for Gene: WBGene00012682
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| WBGene00012682 | SMap | S_parent | Sequence | Y39B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | asp-16 | Person_evidence | WBPerson261 | |||||
| Sequence_name | Y39B6A.23 | ||||||||
| Molecular_name | Y39B6A.23 | ||||||||
| Y39B6A.23.1 | |||||||||
| CE29864 | |||||||||
| Other_name | Y39B6B.j | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39B6A.23 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | asp-16 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-16 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asp | ||||||||
| Allele (103) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00084795 | ||||||||
| 00084796 | |||||||||
| 00084797 | |||||||||
| 00119712 | |||||||||
| 00119713 | |||||||||
| Ortholog (47) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human PGC (progastricsin) and REN (renin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (17) | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.23 | |||||||
| Corresponding_transcript | Y39B6A.23.1 | ||||||||
| Other_sequence | ACC21341_1 | ||||||||
| EY465139.1 | |||||||||
| MH05110 | |||||||||
| MH10000 | |||||||||
| Acan_isotig10539 | |||||||||
| ACC03533_2 | |||||||||
| PTC03231_1 | |||||||||
| SSC02957_1 | |||||||||
| Associated_feature | WBsf1003109 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00056177 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014753 | ||||||||
| Expr1159681 | |||||||||
| Microarray_results | A_12_P111650 | ||||||||
| GPL14144_Y39B6A.23_1039-1098_0.956_1_A | |||||||||
| GPL19516_CGZ0044834 | |||||||||
| GPL21109_Y39B6A.23 | |||||||||
| GPL3518_CE29864 | |||||||||
| GPL8304_CE_WBGene00012682_A | |||||||||
| GPL8673_Y39B6A_23P00167 | |||||||||
| GPL8673_Y39B6A_23P00601 | |||||||||
| GPL8673_Y39B6A_23P01056 | |||||||||
| Expression_cluster (69) | |||||||||
| Map_info | Map | V | Position | 18.4987 | |||||
| Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059378 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
