WormBase Tree Display for Gene: WBGene00012886
expand all nodes | collapse all nodes | view schema
WBGene00012886 | SMap | S_parent | Sequence | Y45F10D | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y45F10D.6 | |||||||
Molecular_name | Y45F10D.6 | ||||||||
Y45F10D.6.1 | |||||||||
CE39842 | |||||||||
Other_name | CELE_Y45F10D.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y45F10D.6 | ||||||||
DB_info | Database | AceView | gene | 4O560 | |||||
WormQTL | gene | WBGene00012886 | |||||||
WormFlux | gene | WBGene00012886 | |||||||
NDB | locus_tag | CELE_Y45F10D.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012886|UniProtKB=O62476 | |||||||
family | PTHR37978 | ||||||||
NCBI | gene | 189925 | |||||||
RefSeq | protein | NM_070261.3 | |||||||
TREEFAM | TREEFAM_ID | TF317879 | |||||||
TrEMBL | UniProtAcc | O62476 | |||||||
UniProt_GCRP | UniProtAcc | O62476 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (42) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (21) | |||||||||
Paralog | WBGene00008535 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00008536 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00010483 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011018 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00012303 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in hypodermis and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-three chemicals including tryptophan; Mercuric Chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y45F10D.6 | |||||||
Corresponding_CDS_history | Y45F10D.6:wp154 | ||||||||
Corresponding_transcript | Y45F10D.6.1 | ||||||||
Associated_feature | WBsf231169 | ||||||||
Experimental_info | RNAi_result | WBRNAi00056605 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020610 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015988 | ||||||||
Expr1035698 | |||||||||
Expr1160072 | |||||||||
Expr2007552 | |||||||||
Expr2025788 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (190) | |||||||||
Interaction (41) | |||||||||
Map_info | Positive | Positive_clone | Y45F10D | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 10.8616 | |||||||
Reference | WBPaper00064623 | ||||||||
Method | Gene |