WormBase Tree Display for Gene: WBGene00013042
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| WBGene00013042 | SMap | S_parent | Sequence | Y49E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | cccp-1 | Paper_evidence | WBPaper00045066 | |||||
| Person_evidence | WBPerson625 | ||||||||
| WBPerson567 | |||||||||
| WBPerson2812 | |||||||||
| Sequence_name | Y49E10.23 | ||||||||
| Molecular_name | Y49E10.23a | ||||||||
| Y49E10.23a.1 | |||||||||
| CE22238 | |||||||||
| Y49E10.23b | |||||||||
| CE32078 | |||||||||
| Y49E10.23b.1 | |||||||||
| Other_name | unc-81 | Person_evidence | WBPerson261 | ||||||
| CELE_Y49E10.23 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | cccp-1 | ||||||||
| DB_info | Database | AceView | gene | 3N573 | |||||
| WormQTL | gene | WBGene00013042 | |||||||
| WormFlux | gene | WBGene00013042 | |||||||
| NDB | locus_tag | CELE_Y49E10.23 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013042|UniProtKB=Q8I0Z1 | |||||||
| family | PTHR18911 | ||||||||
| NCBI | gene | 176674 | |||||||
| RefSeq | protein | NM_067227.7 | |||||||
| NM_181971.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF328785 | |||||||
| TrEMBL | UniProtAcc | Q8I0Z1 | |||||||
| Q9XTT2 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8I0Z1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Dec 2010 12:16:25 | WBPerson2970 | Name_change | CGC_name | cccp-1 | ||||
| 3 | 30 Apr 2014 16:40:52 | WBPerson2970 | Name_change | Other_name | unc-81 | ||||
| 4 | 10 Jun 2014 12:12:12 | WBPerson1983 | Event | Acquires_merge | WBGene00006813 | ||||
| Acquires_merge | WBGene00006813 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cccp | ||||||||
| Reference_allele | WBVar00143762 | ||||||||
| Allele (261) | |||||||||
| Legacy_information | e1122 : slightly irregular movement. ES1 ME3. NA1. | ||||||||
| See also e1122 | |||||||||
| [C.elegansII] e1122 : slightly irregular movement. ES1 ME3. NA1. [CB; ZZ] | |||||||||
| Strain | WBStrain00004247 | ||||||||
| WBStrain00006664 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Enables small GTPase binding activity. Involved in dense core granule maturation and regulation of locomotion involved in locomotory behavior. Located in axon; neuronal cell body; and perinuclear region of cytoplasm. Expressed in intestine and spermatheca. Is an ortholog of human CCDC186 (coiled-coil domain containing 186). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49E10.23a | |||||||
| Y49E10.23b | |||||||||
| Corresponding_CDS_history | Y49E10.23:wp88 | ||||||||
| Corresponding_transcript | Y49E10.23a.1 | ||||||||
| Y49E10.23b.1 | |||||||||
| Other_sequence (25) | |||||||||
| Associated_feature | WBsf645661 | ||||||||
| WBsf645662 | |||||||||
| WBsf659609 | |||||||||
| WBsf994654 | |||||||||
| WBsf994655 | |||||||||
| WBsf1016204 | |||||||||
| WBsf225911 | |||||||||
| WBsf225912 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037295 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007127 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057020 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007148 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020778 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092879 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057019 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11741 | ||||||||
| Expr11743 | |||||||||
| Expr1013507 | |||||||||
| Expr1035798 | |||||||||
| Expr1160462 | |||||||||
| Expr2009754 | |||||||||
| Expr2027994 | |||||||||
| Drives_construct | WBCnstr00019346 | ||||||||
| WBCnstr00019347 | |||||||||
| WBCnstr00029772 | |||||||||
| Construct_product | WBCnstr00019347 | ||||||||
| WBCnstr00029772 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | III | Position | 17.9495 | Error | 0.008502 | |||
| Positive | Positive_clone | Y49E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 90 | |||||||
| Multi_point | 89 | ||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00000608 | ||||||||
| WBPaper00001256 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041549 | |||||||||
| WBPaper00043440 | |||||||||
| WBPaper00045066 | |||||||||
| WBPaper00048038 | |||||||||
| WBPaper00051572 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058523 | |||||||||
| WBPaper00063151 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag. | |||||||||
| Method | Gene |
