WormBase Tree Display for Gene: WBGene00013058
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| WBGene00013058 | SMap | S_parent | Sequence | Y51A2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | clec-247 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y51A2A.1 | ||||||||
| Molecular_name | Y51A2A.1 | ||||||||
| Y51A2A.1.1 | |||||||||
| CE48136 | |||||||||
| Other_name | CELE_Y51A2A.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-247 | ||||||||
| DB_info | Database | AceView | gene | 5S769 | |||||
| WormQTL | gene | WBGene00013058 | |||||||
| WormFlux | gene | WBGene00013058 | |||||||
| NDB | locus_tag | CELE_Y51A2A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013058|UniProtKB=Q9XWQ0 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 190117 | |||||||
| RefSeq | protein | NM_075176.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9XWQ0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWQ0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-247 | ||||
| 3 | 22 Feb 2008 08:58:42 | WBPerson4025 | Event | Split_into | WBGene00077645 | ||||
| 4 | 23 Jul 2009 15:38:39 | WBPerson4025 | Event | Acquires_merge | WBGene00077645 | ||||
| Acquires_merge | WBGene00077645 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (127) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (95) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in NSM based on tiling array studies. Is affected by several genes including daf-2; rrf-3; and lin-4 based on microarray and RNA-seq studies. Is affected by four chemicals including glycine; Cry5B; and Chlorpyrifos based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y51A2A.1 | |||||||
| Corresponding_CDS_history | Y51A2A.1:wp188 | ||||||||
| Y51A2A.1:wp205 | |||||||||
| Y51A2A.1:wp235 | |||||||||
| Corresponding_transcript | Y51A2A.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020853 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057111 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021534 | ||||||||
| Expr1160557 | |||||||||
| Expr2028389 | |||||||||
| Microarray_results | SMD_Y51A2A.1 | ||||||||
| 183905_at | |||||||||
| Aff_Y51A2A.1 | |||||||||
| GPL14144_Y51A2A.1_229-288_0.942_4_A | |||||||||
| GPL3518_CE20273 | |||||||||
| GPL8304_CE_WBGene00013058_A | |||||||||
| GPL8673_Y51A2A_1P00226 | |||||||||
| GPL9450_Y51A2A.1 | |||||||||
| cea2.i.47597 | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction (66) | |||||||||
| Map_info | Map | V | Position | 15.0577 | Error | 0.051991 | |||
| Positive | Positive_clone | Y51A2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
