WormBase Tree Display for Gene: WBGene00013143
expand all nodes | collapse all nodes | view schema
| WBGene00013143 | SMap | S_parent | Sequence | Y53C12B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y53C12B.1 | |||||||
| Molecular_name | Y53C12B.1 | ||||||||
| Y53C12B.1.1 | |||||||||
| CE14894 | |||||||||
| Other_name | CELE_Y53C12B.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y53C12B.1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| Strain | WBStrain00037695 | ||||||||
| WBStrain00034976 | |||||||||
| WBStrain00034977 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031713 | ||||||||
| 00031714 | |||||||||
| 00031715 | |||||||||
| 00031716 | |||||||||
| 00031717 | |||||||||
| 00120070 | |||||||||
| 00120071 | |||||||||
| Contained_in_operon | CEOP2452 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable U3 snoRNA binding activity. Predicted to be involved in endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus. Predicted to be part of 90S preribosome. Expressed in tail. Is an ortholog of human TBL3 (transducin beta like 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53C12B.1 | |||||||
| Corresponding_transcript | Y53C12B.1.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf650455 | ||||||||
| WBsf665968 | |||||||||
| WBsf989134 | |||||||||
| WBsf223702 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00071199 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057255 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007646 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077912 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009377 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram743 | ||||||||
| Expr7034 | |||||||||
| Expr1027495 | |||||||||
| Expr1035834 | |||||||||
| Expr1160692 | |||||||||
| Expr1200260 | |||||||||
| Expr1200261 | |||||||||
| Expr2007836 | |||||||||
| Expr2026076 | |||||||||
| Drives_construct | WBCnstr00003132 | ||||||||
| WBCnstr00029746 | |||||||||
| Construct_product | WBCnstr00029746 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (253) | |||||||||
| Map_info | Positive | Positive_clone | Y53C12B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.7075 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
