WormBase Tree Display for Gene: WBGene00013240
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| WBGene00013240 | SMap | S_parent | Sequence | Y56A3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y56A3A.28 | |||||||
| Molecular_name | Y56A3A.28 | ||||||||
| Y56A3A.28.1 | |||||||||
| CE37294 | |||||||||
| Y56A3A.28.2 | |||||||||
| Other_name | CELE_Y56A3A.28 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y56A3A.28 | ||||||||
| DB_info | Database | AceView | gene | 3N52 | |||||
| WormQTL | gene | WBGene00013240 | |||||||
| WormFlux | gene | WBGene00013240 | |||||||
| NDB | locus_tag | CELE_Y56A3A.28 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013240|UniProtKB=Q9U235 | |||||||
| family | PTHR24393 | ||||||||
| NCBI | gene | 176632 | |||||||
| RefSeq | protein | NM_001379940.2 | |||||||
| TREEFAM | TREEFAM_ID | TF350853 | |||||||
| TrEMBL | UniProtAcc | Q9U235 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U235 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Aug 2004 11:03:43 | WBPerson1983 | Event | Acquires_merge | WBGene00013245 | ||||
| Acquires_merge | WBGene00013245 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (314) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098689 | ||||||||
| 00098690 | |||||||||
| 00098691 | |||||||||
| 00098692 | |||||||||
| 00098693 | |||||||||
| Contained_in_operon | CEOP3746 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00000483 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00001207 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00003015 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00009448 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016905 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00003380 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011661 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013970 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022592 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y56A3A.28 | |||||||
| Corresponding_CDS_history | Y56A3A.28:wp130 | ||||||||
| Corresponding_transcript | Y56A3A.28.1 | ||||||||
| Y56A3A.28.2 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf667485 | ||||||||
| WBsf978856 | |||||||||
| WBsf981610 | |||||||||
| WBsf994544 | |||||||||
| Transcription_factor | WBTranscriptionFactor000866 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057594 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006896 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006866 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021076 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011529 | ||||||||
| Expr1035898 | |||||||||
| Expr1161012 | |||||||||
| Expr2008001 | |||||||||
| Expr2026242 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (53) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | Y56A3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 13.6284 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00061738 | |||||||||
| WBPaper00065215 | |||||||||
| Method | Gene |
