WormBase Tree Display for Gene: WBGene00013265
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| WBGene00013265 | SMap | S_parent | Sequence | Y57A10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | parn-2 | Person_evidence | WBPerson150 | |||||
| Sequence_name | Y57A10A.25 | ||||||||
| Molecular_name | Y57A10A.25 | ||||||||
| Y57A10A.25.1 | |||||||||
| CE22629 | |||||||||
| Other_name | CELE_Y57A10A.25 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | parn-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 May 2013 15:54:27 | WBPerson2970 | Name_change | CGC_name | parn-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | parn | ||||||||
| Allele (183) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095839 | ||||||||
| 00095840 | |||||||||
| 00095841 | |||||||||
| 00095842 | |||||||||
| 00095843 | |||||||||
| 00120160 | |||||||||
| Contained_in_operon | CEOP2596 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00010734 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable 3'-5'-RNA exonuclease activity and snRNA binding activity. Predicted to be involved in snRNA 3'-end processing. Predicted to be located in Cajal body and cytoplasm. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia type 7. Is an ortholog of human TOE1 (target of EGR1, exonuclease). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060276 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15954) | ||||
| Molecular_info | Corresponding_CDS | Y57A10A.25 | |||||||
| Corresponding_transcript | Y57A10A.25.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf224047 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00021103 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037564 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057627 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013114 | ||||||||
| Expr1035919 | |||||||||
| Expr1161037 | |||||||||
| Expr2014735 | |||||||||
| Expr2032969 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (91) | |||||||||
| Interaction | WBInteraction000030912 | ||||||||
| WBInteraction000511550 | |||||||||
| Map_info | Map | II | Position | 7.39165 | |||||
| Positive | Positive_clone | Y57A10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00043886 | |||||||||
| WBPaper00055050 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058452 | |||||||||
| WBPaper00058597 | |||||||||
| WBPaper00060712 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
