WormBase Tree Display for Gene: WBGene00013270
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| WBGene00013270 | SMap | S_parent | Sequence | Y57A10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y57A10A.31 | |||||||
| Molecular_name | Y57A10A.31 | ||||||||
| Y57A10A.31.1 | |||||||||
| CE43429 | |||||||||
| Other_name | CELE_Y57A10A.31 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y57A10A.31 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Dec 2008 10:41:36 | WBPerson1983 | Event | Acquires_merge | WBGene00013271 | ||||
| Acquires_merge | WBGene00013271 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (386) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095807 | ||||||||
| 00095808 | |||||||||
| 00095809 | |||||||||
| 00095810 | |||||||||
| 00095811 | |||||||||
| 00095812 | |||||||||
| 00095813 | |||||||||
| 00120165 | |||||||||
| Ortholog (52) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin binding activity and ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein linear polyubiquitination. Predicted to be part of LUBAC complex. Human ortholog(s) of this gene implicated in Gordon Holmes syndrome. Is an ortholog of human RNF216 (ring finger protein 216). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111587 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21698) | ||||
| Molecular_info | Corresponding_CDS | Y57A10A.31 | |||||||
| Corresponding_CDS_history | Y57A10A.31:wp198 | ||||||||
| Corresponding_transcript | Y57A10A.31.1 | ||||||||
| Other_sequence | OVC03327_1 | ||||||||
| GO249154.1 | |||||||||
| GO240265.1 | |||||||||
| GO249148.1 | |||||||||
| GO239474.1 | |||||||||
| FC550259.1 | |||||||||
| MA03254 | |||||||||
| MJ03438 | |||||||||
| MH05734 | |||||||||
| AW453467.1 | |||||||||
| Associated_feature | WBsf658301 | ||||||||
| WBsf658302 | |||||||||
| WBsf978536 | |||||||||
| WBsf990045 | |||||||||
| WBsf990046 | |||||||||
| WBsf1013403 | |||||||||
| WBsf1013404 | |||||||||
| WBsf222258 | |||||||||
| WBsf222259 | |||||||||
| Transcription_factor | WBTranscriptionFactor000867 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00037571 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076831 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021093 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057635 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021091 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037570 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057634 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014373 | ||||||||
| Expr1035924 | |||||||||
| Expr1161044 | |||||||||
| Expr2008019 | |||||||||
| Expr2026260 | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction | WBInteraction000547454 | ||||||||
| WBInteraction000549341 | |||||||||
| WBInteraction000570272 | |||||||||
| Map_info | Positive | Positive_clone | Y57A10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 7.61393 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
