WormBase Tree Display for Gene: WBGene00013326
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| WBGene00013326 | SMap | S_parent | Sequence | Y57G11C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | anoh-2 | Person_evidence | WBPerson6532 | |||||
| Sequence_name | Y57G11C.37 | ||||||||
| Molecular_name | Y57G11C.37a | ||||||||
| Y57G11C.37a.1 | |||||||||
| CE40485 | |||||||||
| Y57G11C.37b | |||||||||
| CE46692 | |||||||||
| Y57G11C.37a.2 | |||||||||
| Y57G11C.37b.1 | |||||||||
| Other_name | CELE_Y57G11C.37 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | anoh-2 | ||||||||
| DB_info | Database | AceView | gene | 4P439 | |||||
| WormQTL | gene | WBGene00013326 | |||||||
| WormFlux | gene | WBGene00013326 | |||||||
| NDB | locus_tag | CELE_Y57G11C.37 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013326|UniProtKB=H2L2L3 | |||||||
| family | PTHR12308 | ||||||||
| NCBI | gene | 178395 | |||||||
| RefSeq | protein | NM_001383246.2 | |||||||
| NM_001268891.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF350178 | |||||||
| TrEMBL | UniProtAcc | H2L2L3 | |||||||
| Q8I4C3 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L2L3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jun 2011 16:50:10 | WBPerson2970 | Name_change | CGC_name | anoh-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | anoh | ||||||||
| Allele (313) | |||||||||
| Strain | WBStrain00003158 | ||||||||
| In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023567 | ||||||||
| 00023568 | |||||||||
| 00023569 | |||||||||
| 00023570 | |||||||||
| 00023571 | |||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00010138 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane. Expressed in somatic nervous system; spermatheca; and touch receptor neurons. Is an ortholog of human ANO8 (anoctamin 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y57G11C.37a | |||||||
| Y57G11C.37b | |||||||||
| Corresponding_CDS_history | Y57G11C.37:wp109 | ||||||||
| Y57G11C.37:wp165 | |||||||||
| Corresponding_transcript | Y57G11C.37a.1 | ||||||||
| Y57G11C.37a.2 | |||||||||
| Y57G11C.37b.1 | |||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf998615 | ||||||||
| WBsf998616 | |||||||||
| WBsf998617 | |||||||||
| WBsf229522 | |||||||||
| Experimental_info | Expr_pattern | Chronogram1979 | |||||||
| Expr7081 | |||||||||
| Expr13656 | |||||||||
| Expr13657 | |||||||||
| Expr1026025 | |||||||||
| Expr1035950 | |||||||||
| Expr1161116 | |||||||||
| Expr2009342 | |||||||||
| Expr2027578 | |||||||||
| Drives_construct | WBCnstr00003636 | ||||||||
| WBCnstr00018804 | |||||||||
| WBCnstr00019947 | |||||||||
| WBCnstr00029684 | |||||||||
| WBCnstr00039928 | |||||||||
| WBCnstr00039929 | |||||||||
| Construct_product | WBCnstr00019947 | ||||||||
| WBCnstr00029684 | |||||||||
| WBCnstr00039929 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (130) | |||||||||
| SAGE_tag | SAGE:gcaacacttcacaacaa | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:aatcaccgaa | Strand | Antisense | |||||||
| SAGE:agtgatggaacattgag | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:agaatgccca | Strand | Antisense | |||||||
| SAGE:gggtggacaa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gcagaaggct | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gatgctgtcctggctct | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgatcctggcgtcgaaa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ctccaatatc | Strand | Antisense | |||||||
| Map_info | Map | IV | Position | 12.2886 | Error | 0.00036 | |||
| Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00038925 | |||||||||
| WBPaper00044384 | |||||||||
| WBPaper00047855 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
