WormBase Tree Display for Gene: WBGene00013336
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| WBGene00013336 | SMap | S_parent | Sequence | Y57G11C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pnc-2 | Person_evidence | WBPerson238 | |||||
| Sequence_name | Y57G11C.47 | ||||||||
| Molecular_name | Y57G11C.47 | ||||||||
| Y57G11C.47.1 | |||||||||
| CE35124 | |||||||||
| Other_name | CELE_Y57G11C.47 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pnc-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 May 2008 16:27:34 | WBPerson2970 | Name_change | CGC_name | pnc-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pnc | ||||||||
| Allele (100) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082507 | ||||||||
| 00082508 | |||||||||
| 00082509 | |||||||||
| 00082510 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00021395 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | pnc-2 encodes a pyrazinamidase/nicotinamidase, orthologous to budding yeast Pnc1p and paralogous to PNC-1. | Paper_evidence | WBPaper00029149 | |||||
| WBPaper00031677 | |||||||||
| WBPaper00031678 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 20 Nov 2009 00:00:00 | ||||||||
| Automated_description | Enables nicotinamidase activity. Involved in nicotinamide metabolic process. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y57G11C.47 | |||||||
| Corresponding_transcript | Y57G11C.47.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf998657 | ||||||||
| WBsf1018709 | |||||||||
| Experimental_info | Expr_pattern | Expr1013263 | |||||||
| Expr1161127 | |||||||||
| Expr2014982 | |||||||||
| Expr2033217 | |||||||||
| Drives_construct | WBCnstr00029678 | ||||||||
| Construct_product | WBCnstr00029678 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (64) | |||||||||
| Interaction | WBInteraction000046240 | ||||||||
| WBInteraction000314472 | |||||||||
| WBInteraction000397810 | |||||||||
| WBInteraction000428609 | |||||||||
| WBInteraction000463318 | |||||||||
| WBInteraction000464445 | |||||||||
| WBInteraction000467105 | |||||||||
| WBInteraction000468695 | |||||||||
| WBInteraction000473058 | |||||||||
| WBInteraction000474421 | |||||||||
| Map_info | Map | IV | Position | 12.6299 | Error | 0.001375 | |||
| Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035288 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
