WormBase Tree Display for Gene: WBGene00013373
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| WBGene00013373 | SMap | S_parent | Sequence | Y62E10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | popl-7 | Person_evidence | WBPerson3778 | |||||
| Sequence_name | Y62E10A.2 | ||||||||
| Molecular_name | Y62E10A.2 | ||||||||
| Y62E10A.2.1 | |||||||||
| CE52608 | |||||||||
| Y62E10A.2.2 | |||||||||
| Other_name | CELE_Y62E10A.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | popl-7 | ||||||||
| DB_info | Database | AceView | gene | 4O135 | |||||
| WormQTL | gene | WBGene00013373 | |||||||
| WormFlux | gene | WBGene00013373 | |||||||
| NDB | locus_tag | CELE_Y62E10A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013373|UniProtKB=A0A2K5ATW7 | |||||||
| family | PTHR15314 | ||||||||
| NCBI | gene | 178298 | |||||||
| RefSeq | protein | NM_001380512.3 | |||||||
| TREEFAM | TREEFAM_ID | TF313948 | |||||||
| TrEMBL | UniProtAcc | A0A2K5ATW7 | |||||||
| UniProt_GCRP | UniProtAcc | A0A2K5ATW7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 06 Mar 2018 14:43:37 | WBPerson4025 | Event | Split_into | WBGene00302968 | ||||
| 3 | 21 Nov 2019 11:04:57 | WBPerson1983 | Name_change | CGC_name | popl-7 | ||||
| Split_into | WBGene00302968 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | popl | ||||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003130 | ||||||||
| 00003131 | |||||||||
| 00003132 | |||||||||
| 00003133 | |||||||||
| 00003134 | |||||||||
| 00003135 | |||||||||
| Contained_in_operon | CEOP4540 | ||||||||
| CEOP5590 | |||||||||
| Ortholog (17) | |||||||||
| Paralog | WBGene00303023 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | Y62E10A.2 encodes an ortholog of Pop7 (Rpp20), a protein subunit sharedby the endoribonucleases RNase MRP and RNAse P; RNAse MRP cleavesmitochondrial RNA in mitochondrial DNA synthesis, nucleolar pre-rRNA inribosome synthesis, and at least one mRNA (CLB2) involved in cell-cycleregulation; RNAse P cleaves tRNA precursors to produce their mature 5'end; Y62E10A.2 may dissociate from the RNase MRP complex when it bindsto ribosomal precursors. | Paper_evidence | WBPaper00028606 | |||||
| WBPaper00028843 | |||||||||
| WBPaper00028845 | |||||||||
| WBPaper00028925 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 06 Jan 2007 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in intracellular transport and protein secretion. Predicted to be located in Golgi membrane. Is an ortholog of human TMEM167A (transmembrane protein 167A). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y62E10A.2 | |||||||
| Corresponding_CDS_history | Y62E10A.2:wp132 | ||||||||
| Y62E10A.2a:wp264 | |||||||||
| Y62E10A.2b:wp264 | |||||||||
| Corresponding_transcript | Y62E10A.2.1 | ||||||||
| Y62E10A.2.2 | |||||||||
| Associated_feature | WBsf646521 | ||||||||
| WBsf998392 | |||||||||
| WBsf998393 | |||||||||
| WBsf1018523 | |||||||||
| WBsf229427 | |||||||||
| WBsf229428 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00097210 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00026886 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057850 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097345 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009404 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097255 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071491 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026724 | ||||||||
| Expr1035972 | |||||||||
| Expr1161283 | |||||||||
| Expr2008135 | |||||||||
| Expr2026374 | |||||||||
| Drives_construct | WBCnstr00029669 | ||||||||
| Construct_product | WBCnstr00029669 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction | WBInteraction000029448 | ||||||||
| WBInteraction000119271 | |||||||||
| WBInteraction000123564 | |||||||||
| WBInteraction000161497 | |||||||||
| WBInteraction000211460 | |||||||||
| WBInteraction000233100 | |||||||||
| WBInteraction000568100 | |||||||||
| Map_info | Positive | Positive_clone | Y62E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 8.74535 | |||||||
| Reference | WBPaper00027740 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
