WormBase Tree Display for Gene: WBGene00014098
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| WBGene00014098 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ogdh-2 | Person_evidence | WBPerson151 | |||||
| Sequence_name | ZK836.2 | ||||||||
| Molecular_name | ZK836.2a | ||||||||
| ZK836.2a.1 | |||||||||
| CE35706 | |||||||||
| ZK836.2b | |||||||||
| CE46049 | |||||||||
| ZK836.2b.1 | |||||||||
| Other_name | CELE_ZK836.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ogdh-2 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Nov 2016 11:06:22 | WBPerson2970 | Name_change | CGC_name | ogdh-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ogdh | ||||||||
| Allele (183) | |||||||||
| Strain | WBStrain00002693 | ||||||||
| WBStrain00002938 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008765 | ||||||||
| 00008766 | |||||||||
| 00008767 | |||||||||
| 00079154 | |||||||||
| 00079155 | |||||||||
| 00079156 | |||||||||
| 00120830 | |||||||||
| 00120831 | |||||||||
| 00120832 | |||||||||
| 00120833 | |||||||||
| Contained_in_operon | CEOP5328 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00020679 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable oxoglutarate dehydrogenase (succinyl-transferring) activity and thiamine pyrophosphate binding activity. Predicted to be involved in glycolytic process and tricarboxylic acid cycle. Predicted to be located in mitochondrion. Expressed in body wall musculature. Human ortholog(s) of this gene implicated in 2-aminoadipic 2-oxoadipic aciduria and Charcot-Marie-Tooth disease axonal type 2Q. Is an ortholog of human DHTKD1 (dehydrogenase E1 and transketolase domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111453 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23537) | ||||
| DOID:0110170 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23537) | ||||||
| Molecular_info | Corresponding_CDS | ZK836.2a | |||||||
| ZK836.2b | |||||||||
| Corresponding_CDS_history | ZK836.2:wp109 | ||||||||
| Corresponding_transcript | ZK836.2a.1 | ||||||||
| ZK836.2b.1 | |||||||||
| Other_sequence (60) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022189 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059758 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7262 | ||||||||
| Expr7263 | |||||||||
| Expr1014281 | |||||||||
| Expr1036316 | |||||||||
| Expr1163182 | |||||||||
| Expr2014615 | |||||||||
| Expr2032848 | |||||||||
| Drives_construct | WBCnstr00003235 | ||||||||
| WBCnstr00029310 | |||||||||
| Construct_product | WBCnstr00016485 | ||||||||
| WBCnstr00029310 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (65) | |||||||||
| Map_info | Map | V | Position | 3.74203 | |||||
| Positive | Positive_clone | ZK836 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064898 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
