WormBase Tree Display for Gene: WBGene00015287
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| WBGene00015287 | SMap | S_parent | Sequence | C01B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | osta-1 | Person_evidence | WBPerson7115 | |||||
| WBPerson573 | |||||||||
| Sequence_name | C01B12.4 | ||||||||
| Molecular_name | C01B12.4 | ||||||||
| C01B12.4.1 | |||||||||
| CE34642 | |||||||||
| Other_name | CELE_C01B12.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | osta-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Jun 2012 17:03:10 | WBPerson2970 | Name_change | CGC_name | osta-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | osta | ||||||||
| Allele (57) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029437 | ||||||||
| 00029438 | |||||||||
| 00029439 | |||||||||
| 00029440 | |||||||||
| 00029441 | |||||||||
| 00029442 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00009574 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012182 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015942 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Located in periciliary membrane compartment. Expressed in amphid neurons; ciliated neurons; phasmid neurons; and sensory neurons. Human ortholog(s) of this gene implicated in progressive familial intrahepatic cholestasis. Is an ortholog of human SLC51A (solute carrier family 51 member A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070221 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29955) | ||||
| Molecular_info | Corresponding_CDS | C01B12.4 | |||||||
| Corresponding_CDS_history | C01B12.4:wp104 | ||||||||
| Corresponding_transcript | C01B12.4.1 | ||||||||
| Other_sequence | Tcol_isotig14047 | ||||||||
| ACC08410_2 | |||||||||
| Dviv_isotig32169 | |||||||||
| EY473485.1 | |||||||||
| EY466235.1 | |||||||||
| FF681291.1 | |||||||||
| Oden_isotig26070 | |||||||||
| HBC03252_1 | |||||||||
| EY459586.1 | |||||||||
| Associated_feature | WBsf643883 | ||||||||
| WBsf657226 | |||||||||
| WBsf220691 | |||||||||
| WBsf220692 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028263 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039248 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009888 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10832 | ||||||||
| Expr10833 | |||||||||
| Expr1010277 | |||||||||
| Expr1143389 | |||||||||
| Expr2014651 | |||||||||
| Expr2032884 | |||||||||
| Drives_construct | WBCnstr00017619 | ||||||||
| WBCnstr00017625 | |||||||||
| WBCnstr00017628 | |||||||||
| WBCnstr00028957 | |||||||||
| Construct_product | WBCnstr00017621 | ||||||||
| WBCnstr00017624 | |||||||||
| WBCnstr00017626 | |||||||||
| WBCnstr00017627 | |||||||||
| WBCnstr00017628 | |||||||||
| WBCnstr00028957 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction | WBInteraction000226598 | ||||||||
| WBInteraction000226956 | |||||||||
| WBInteraction000520050 | |||||||||
| WBInteraction000520051 | |||||||||
| WBInteraction000520052 | |||||||||
| Map_info | Map | II | Position | -18.0162 | |||||
| Positive | Positive_clone | C01B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042256 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
