WormBase Tree Display for Gene: WBGene00015322
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| WBGene00015322 | SMap | S_parent | Sequence | C02B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C02B8.3 | |||||||
| Molecular_name | C02B8.3 | ||||||||
| C02B8.3.1 | |||||||||
| CE03892 | |||||||||
| Other_name | CELE_C02B8.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C02B8.3 | ||||||||
| DB_info | Database | AceView | gene | XI757 | |||||
| WormQTL | gene | WBGene00015322 | |||||||
| WormFlux | gene | WBGene00015322 | |||||||
| NDB | locus_tag | CELE_C02B8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015322|UniProtKB=Q11093 | |||||||
| family | PTHR31712 | ||||||||
| NCBI | gene | 182104 | |||||||
| RefSeq | protein | NM_076970.5 | |||||||
| SwissProt | UniProtAcc | Q11093 | |||||||
| TREEFAM | TREEFAM_ID | TF321463 | |||||||
| UniProt_GCRP | UniProtAcc | Q11093 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (66) | |||||||||
| Paralog | WBGene00009087 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010262 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010404 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018258 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; neurons; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by eleven chemicals including multi-walled carbon nanotube; D-glucose; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF5354 and Family of unknown function (DUF5354). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02B8.3 | |||||||
| Corresponding_transcript | C02B8.3.1 | ||||||||
| Associated_feature | WBsf663026 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00039398 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028332 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009974 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010626 | ||||||||
| Expr1143514 | |||||||||
| Expr2000324 | |||||||||
| Expr2018548 | |||||||||
| Drives_construct | WBCnstr00028936 | ||||||||
| Construct_product | WBCnstr00028936 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (151) | |||||||||
| Interaction | WBInteraction000031267 | ||||||||
| WBInteraction000032450 | |||||||||
| WBInteraction000219887 | |||||||||
| WBInteraction000235530 | |||||||||
| WBInteraction000242913 | |||||||||
| WBInteraction000321948 | |||||||||
| WBInteraction000384047 | |||||||||
| WBInteraction000403604 | |||||||||
| WBInteraction000436494 | |||||||||
| WBInteraction000547058 | |||||||||
| Map_info | Positive | Positive_clone | C02B8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -0.510274 | |||||||
| Method | Gene |
