WormBase Tree Display for Gene: WBGene00015485
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| WBGene00015485 | SMap | S_parent | Sequence | C05D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C05D11.8 | |||||||
| Molecular_name | C05D11.8 | ||||||||
| C05D11.8.1 | |||||||||
| CE54171 | |||||||||
| Other_name | CELE_C05D11.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C05D11.8 | ||||||||
| DB_info | Database | AceView | gene | 3H512 | |||||
| WormQTL | gene | WBGene00015485 | |||||||
| WormFlux | gene | WBGene00015485 | |||||||
| NDB | locus_tag | CELE_C05D11.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015485|UniProtKB=Q11187 | |||||||
| family | PTHR21705 | ||||||||
| NCBI | gene | 182260 | |||||||
| RefSeq | protein | NM_001379762.1 | |||||||
| SwissProt | UniProtAcc | Q11187 | |||||||
| TREEFAM | TREEFAM_ID | TF313941 | |||||||
| UniProt_GCRP | UniProtAcc | Q11187 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (68) | |||||||||
| Strain | WBStrain00035529 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3372 | ||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaapa; ABplapaaap; ABprapaaap; and germ line based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by nine chemicals including aldicarb; rotenone; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Family of unknown function (DUF5917); FHF complex subunit HOOK-interacting protein, C-terminal; FHF complex subunit HOOK interacting protein; Retinoic acid induced 16-like protein; and Phosphorylation site. Is an ortholog of human FHIP1A (FHF complex subunit HOOK interacting protein 1A) and FHIP1B (FHF complex subunit HOOK interacting protein 1B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C05D11.8 | |||||||
| Corresponding_CDS_history | C05D11.8:wp275 | ||||||||
| Corresponding_transcript | C05D11.8.1 | ||||||||
| Other_sequence | AYC03264_1 | ||||||||
| FC539236.1 | |||||||||
| AE00303 | |||||||||
| JI165754.1 | |||||||||
| Associated_feature | WBsf666990 | ||||||||
| WBsf666991 | |||||||||
| WBsf992761 | |||||||||
| WBsf992762 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00085085 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039741 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010200 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005321 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001764 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010522 | ||||||||
| Expr1036623 | |||||||||
| Expr1143832 | |||||||||
| Expr2000463 | |||||||||
| Expr2018686 | |||||||||
| Drives_construct | WBCnstr00028810 | ||||||||
| Construct_product | WBCnstr00028810 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (63) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Positive | Positive_clone | C05D11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.28191 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
